RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 UBA1P22314 1058 aaKnown RBP16.1■□□□□ 0.17
PTCH1-217ENST00000548420 RFX1P22670 979 aa16.1■□□□□ 0.17
PTCH1-217ENST00000548420 ASPRV1Q53RT3 343 aa16.1■□□□□ 0.17
PTCH1-217ENST00000548420 RALYLQ86SE5 291 aaKnown RBP16.1■□□□□ 0.17
PTCH1-217ENST00000548420 MRPL43Q8N983 215 aaKnown RBP16.1■□□□□ 0.17
PTCH1-217ENST00000548420 GPR152Q8TDT2 470 aa16.1■□□□□ 0.17
PTCH1-217ENST00000548420 NELL1Q92832 810 aa16.1■□□□□ 0.17
PTCH1-217ENST00000548420 SECISBP2LQ93073 1101 aaKnown RBP16.1■□□□□ 0.17
PTCH1-217ENST00000548420 TMX1Q9H3N1 280 aa16.1■□□□□ 0.17
PTCH1-217ENST00000548420 PCDHGA2Q9Y5H1 932 aa16.1■□□□□ 0.17
PTCH1-217ENST00000548420 TBKBP1A7MCY6 615 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 GOLGA8HP0CJ92 632 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 GNAT1P11488 350 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 EPCAMP16422 314 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 CSTF1Q05048 431 aaKnown RBP16.09■□□□□ 0.17
PTCH1-217ENST00000548420 TMC5Q6UXY8 1006 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 SLC44A3Q8N4M1 653 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 PJA1Q8NG27 643 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 ATRIPQ8WXE1 791 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 ACSF2Q96CM8 615 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-217ENST00000548420 BORCS6Q96GS4 357 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-217ENST00000548420 UBA5Q9GZZ9 404 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 SENP2Q9HC62 589 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 IGSF9Q9P2J2 1179 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 FBXO4Q9UKT5 387 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 LHX6Q9UPM6 363 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 DOCK5Q9H7D0 1870 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 MIA3Q5JRA6 1907 aa16.09■□□□□ 0.17
PTCH1-217ENST00000548420 SMG1Q96Q15 3661 aaKnown RBP16.09■□□□□ 0.17
PTCH1-217ENST00000548420 PALM3A6NDB9 673 aaPredicted RBP16.08■□□□□ 0.16
PTCH1-217ENST00000548420 TAF4O00268 1085 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
PTCH1-217ENST00000548420 PBX3P40426 434 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 TROAPQ12815 778 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 UNQ6494/PRO21346Q6UXR6 183 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 OTOP3Q7RTS5 596 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 TMC7Q7Z402 723 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 DNAJB3Q8WWF6 145 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 KCNB2Q92953 911 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 TMEM121BQ9BXQ6 578 aaPredicted RBP16.08■□□□□ 0.16
PTCH1-217ENST00000548420 PXMP2Q9NR77 195 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 MAD2L2Q9UI95 211 aa16.08■□□□□ 0.16
PTCH1-217ENST00000548420 SRRM3A6NNA2 597 aaPredicted RBP16.07■□□□□ 0.16
PTCH1-217ENST00000548420 MGEA5O60502 916 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 MCM5P33992 734 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 WTAPQ15007 396 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 SART3Q15020 963 aaKnown RBP16.07■□□□□ 0.16
PTCH1-217ENST00000548420 RNF20Q5VTR2 975 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 ARHGEF16Q5VV41 709 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 LRRC55Q6ZSA7 311 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 ADGRF4Q8IZF3 695 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 ZBTB10Q96DT7 871 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 MTMR8Q96EF0 704 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 MAP3K14Q99558 947 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 CPVLQ9H3G5 476 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 LY9Q9HBG7 655 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 ARHGEF3Q9NR81 526 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 ZSCAN32Q9NX65 697 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 PUF60Q9UHX1 559 aaKnown RBP16.07■□□□□ 0.16
PTCH1-217ENST00000548420 PADI3Q9ULW8 664 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 DMXL2Q8TDJ6 3036 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 LOC400499M0QZD8 3231 aa16.07■□□□□ 0.16
PTCH1-217ENST00000548420 WDFY3Q8IZQ1 3526 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 AKAP13Q12802 2813 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 ITPR1Q14643 2758 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 DOCK8Q8NF50 2099 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 ERICH2A1L162 156 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 NCLP19338 710 aaKnown RBP16.06■□□□□ 0.16
PTCH1-217ENST00000548420 LIFRP42702 1097 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 LPAL2Q16609 132 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 TSSK4Q6SA08 328 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 GPR149Q86SP6 731 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 RASEFQ8IZ41 740 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 TMTC2Q8N394 836 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 SLC22A17Q8WUG5 538 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 TMEM87BQ96K49 555 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 FTHL17Q9BXU8 183 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 MAF1Q9H063 256 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 JMJD4Q9H9V9 463 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 MLXIPQ9HAP2 919 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 SPATA6Q9NWH7 488 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-217ENST00000548420 LRFN2Q9ULH4 789 aa16.06■□□□□ 0.16
PTCH1-217ENST00000548420 BPTFQ12830 3046 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 TM4SF5O14894 197 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 EPB41L2O43491 1005 aaKnown RBP16.05■□□□□ 0.16
PTCH1-217ENST00000548420 LAMTOR5O43504 91 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 PRC1O43663 620 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 TBC1D4O60343 1298 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 SRFP11831 508 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 SARSP49591 514 aaKnown RBP16.05■□□□□ 0.16
PTCH1-217ENST00000548420 EXOSC10Q01780 885 aaKnown RBP16.05■□□□□ 0.16
PTCH1-217ENST00000548420 GRM4Q14833 912 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 SLC35G1Q2M3R5 365 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 MARCH8Q5T0T0 291 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 CCDC149Q6ZUS6 474 aa16.05■□□□□ 0.16
PTCH1-217ENST00000548420 IL31RAQ8NI17 732 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms