RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 EVPLQ92817 2033 aa12.42□□□□□ -0.42
TMEM116-203ENST00000546537 SALL3Q9BXA9 1300 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 B4E1Z4 1266 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 GPR182O15218 404 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 ADRB1P08588 477 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 EPCAMP16422 314 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 TMC5Q6UXY8 1006 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 GPR149Q86SP6 731 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 C1orf210Q8IVY1 113 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 LRRC43Q8N309 656 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 SLC22A17Q8WUG5 538 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 CDHR1Q96JP9 859 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 RNF19AQ9NV58 838 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 CACNA1IQ9P0X4 2223 aa12.41□□□□□ -0.42
TMEM116-203ENST00000546537 PATJQ8NI35 1801 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 PRR5-ARHGAP8B1AHC4 643 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 HOXA2O43364 376 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
TMEM116-203ENST00000546537 CXCL14O95715 111 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 DCNP07585 359 aaKnown RBP12.4□□□□□ -0.42
TMEM116-203ENST00000546537 RFX1P22670 979 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 CA8P35219 290 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 ARHGAP8P85298 464 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 DSC3Q14574 896 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 BMS1Q14692 1282 aaKnown RBP12.4□□□□□ -0.42
TMEM116-203ENST00000546537 PLCB4Q15147 1175 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 SPECC1Q5M775 1068 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 VARS2Q5ST30 1063 aaKnown RBP12.4□□□□□ -0.42
TMEM116-203ENST00000546537 PHLDB3Q6NSJ2 640 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 MTHFD1LQ6UB35 978 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 BORCS6Q96GS4 357 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 RTKNQ9BST9 563 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 TBC1D17Q9HA65 648 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 GINS2Q9Y248 185 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 IRAK3Q9Y616 596 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 MIA3Q5JRA6 1907 aa12.4□□□□□ -0.42
TMEM116-203ENST00000546537 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-203ENST00000546537 CYTH3O43739 400 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 ITGB5P18084 799 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 NMIQ13287 307 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-203ENST00000546537 GIT2Q14161 759 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 IFIT1BQ5T764 474 aaKnown RBP12.39□□□□□ -0.43
TMEM116-203ENST00000546537 CABP7Q86V35 215 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 MAML2Q8IZL2 1156 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-203ENST00000546537 ZBP1Q9H171 429 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 AZI2Q9H6S1 392 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 SFXN1Q9H9B4 322 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 NCDNQ9UBB6 729 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 CDV3Q9UKY7 258 aaKnown RBP12.39□□□□□ -0.43
TMEM116-203ENST00000546537 CA14Q9ULX7 337 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 SIT1Q9Y3P8 196 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 CHD8Q9HCK8 2581 aa12.39□□□□□ -0.43
TMEM116-203ENST00000546537 DCDC2BA2VCK2 349 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 POTEMA6NI47 508 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 PIK3CDO00329 1044 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 MEIS2O14770 477 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 KLRC1P26715 233 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
TMEM116-203ENST00000546537 LMNB2Q03252 620 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 COL9A2Q14055 689 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-203ENST00000546537 NONOQ15233 471 aaKnown RBP eCLIP12.38□□□□□ -0.43
TMEM116-203ENST00000546537 LETM2Q2VYF4 491 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 USP17L6PQ6QN14 398 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 POTEGQ6S5H5 508 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 PLPPR4Q7Z2D5 763 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 FAM228AQ86W67 206 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 ABI1Q8IZP0 508 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 SMARCC2Q8TAQ2 1214 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 UBAC1Q9BSL1 405 aa12.38□□□□□ -0.43
TMEM116-203ENST00000546537 GPR179Q6PRD1 2367 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 SPTLC1O15269 473 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 N4BP1O75113 896 aaKnown RBP12.37□□□□□ -0.43
TMEM116-203ENST00000546537 CTSAP10619 480 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 SRFP11831 508 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 METAP2P50579 478 aaKnown RBP eCLIP12.37□□□□□ -0.43
TMEM116-203ENST00000546537 STAT5BP51692 787 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 MTMR1Q13613 665 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 GRM4Q14833 912 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 SEC23AQ15436 765 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 ZNF528Q3MIS6 628 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 CLLU1OSQ5K130 101 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 C15orf39Q6ZRI6 1047 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 PPFIBP1Q86W92 1011 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 KIAA0319LQ8IZA0 1049 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 VPS52Q8N1B4 723 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 SLC44A3Q8N4M1 653 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 TMEM87AQ8NBN3 555 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 AUTS2Q8WXX7 1259 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 TMEM169Q96HH4 297 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 CHAMP1Q96JM3 812 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 JPH1Q9HDC5 661 aaPredicted RBP12.37□□□□□ -0.43
TMEM116-203ENST00000546537 PKD2L1Q9P0L9 805 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 RALYQ9UKM9 306 aaKnown RBP12.37□□□□□ -0.43
TMEM116-203ENST00000546537 UBIAD1Q9Y5Z9 338 aa12.37□□□□□ -0.43
TMEM116-203ENST00000546537 DOCK8Q8NF50 2099 aa12.36□□□□□ -0.43
TMEM116-203ENST00000546537 MAFGO15525 162 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms