RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 VAMP4O75379 141 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 ZNF865P0CJ78 1059 aaPredicted RBP8.7□□□□□ -1.02
SVIP-204ENST00000530199 STAT3P40763 770 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 SMAD3P84022 425 aaKnown RBP8.7□□□□□ -1.02
SVIP-204ENST00000530199 AMPD2Q01433 879 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 MAP4K2Q12851 820 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 SF3B3Q15393 1217 aaKnown RBP8.7□□□□□ -1.02
SVIP-204ENST00000530199 DACT2Q5SW24 774 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 CD163Q86VB7 1156 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 NGEFQ8N5V2 710 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 KCTD13Q8WZ19 329 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 ASCC2Q9H1I8 757 aaPredicted RBP8.7□□□□□ -1.02
SVIP-204ENST00000530199 C7orf69Q9H7B7 122 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 CYP26B1Q9NR63 512 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 SFMBT1Q9UHJ3 866 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 MINPP1Q9UNW1 487 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 GPR55Q9Y2T6 319 aaPredicted RBP8.7□□□□□ -1.02
SVIP-204ENST00000530199 ZNF804BA4D1E1 1349 aa8.7□□□□□ -1.02
SVIP-204ENST00000530199 COL4A1P02462 1669 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 SHISA3A0PJX4 238 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 H0Y8X5 98 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 SCG5P05408 212 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 SNRPB2P08579 225 aaKnown RBP8.69□□□□□ -1.02
SVIP-204ENST00000530199 ITIH2P19823 946 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 GABREP78334 506 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 MRPS5P82675 430 aaKnown RBP8.69□□□□□ -1.02
SVIP-204ENST00000530199 TNK2Q07912 1038 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 CYP27C1Q4G0S4 372 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 TMEM145Q8NBT3 493 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 PIWIL2Q8TC59 973 aaKnown RBP8.69□□□□□ -1.02
SVIP-204ENST00000530199 ENOX1Q8TC92 643 aaKnown RBP8.69□□□□□ -1.02
SVIP-204ENST00000530199 CHAC2Q8WUX2 184 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 C11orf49Q9H6J7 331 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 INTS7Q9NVH2 962 aaKnown RBP8.69□□□□□ -1.02
SVIP-204ENST00000530199 THEGQ9P2T0 379 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 STOML1Q9UBI4 398 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 RAXQ9Y2V3 346 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 CAPN6Q9Y6Q1 641 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 SH3TC1Q8TE82 1336 aa8.69□□□□□ -1.02
SVIP-204ENST00000530199 OTOFQ9HC10 1997 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 C1QTNF9BB2RNN3 333 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 BTBD19C9JJ37 291 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 MEIS1O00470 390 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 PDE8AO60658 829 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 UFL1O94874 794 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 CETPP11597 493 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 SDSP20132 328 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 KCNJ6P48051 423 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 CYP4F3Q08477 520 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 NTRK3Q16288 839 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 TMEM31Q5JXX7 168 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 STRIP1Q5VSL9 837 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 NLRP10Q86W26 655 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 SHISA5Q8N114 240 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 MFSD4AQ8N468 514 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 SLC7A14Q8TBB6 771 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 C1orf159Q96HA4 380 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 CAAP1Q9H8G2 361 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 TRIM39Q9HCM9 518 aa8.68□□□□□ -1.02
SVIP-204ENST00000530199 MAGEC2Q9UBF1 373 aaPredicted RBP8.68□□□□□ -1.02
SVIP-204ENST00000530199 XIRP2A4UGR9 3374 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 BLACEA4D250 179 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 GSG1L2A8MUP6 293 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 CPP00450 1065 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 GSNP06396 782 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 CNGA1P29973 690 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 ECI1P42126 302 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 CTSKP43235 329 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 RPS8P62241 208 aaKnown RBP8.67□□□□□ -1.02
SVIP-204ENST00000530199 POU4F1Q01851 419 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 DPY19L1Q2PZI1 675 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 SLC35F1Q5T1Q4 408 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 MORC1Q86VD1 984 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 LRRTM3Q86VH5 581 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 GSTCDQ8NEC7 633 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 HDAC8Q9BY41 377 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.67□□□□□ -1.02
SVIP-204ENST00000530199 NDOR1Q9UHB4 597 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 CPA4Q9UI42 421 aa8.67□□□□□ -1.02
SVIP-204ENST00000530199 PFASO15067 1338 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 FAM170BA6NMN3 283 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 EFCAB14O75071 495 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 SRFP11831 508 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 CYP27A1Q02318 531 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 PRSS53Q2L4Q9 553 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 HSP90AB3PQ58FF7 597 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 CWF19L1Q69YN2 538 aaKnown RBP8.66□□□□□ -1.02
SVIP-204ENST00000530199 ZNF765Q7L2R6 523 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 BRAPQ7Z569 592 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 RNF180Q86T96 592 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 DAGLBQ8NCG7 672 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 PTPRN2Q92932 1015 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 MCMBPQ9BTE3 642 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 MXD3Q9BW11 206 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 TARS2Q9BW92 718 aaKnown RBP8.66□□□□□ -1.02
SVIP-204ENST00000530199 GPR62Q9BZJ7 368 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 TRMT112Q9UI30 125 aaKnown RBP8.66□□□□□ -1.02
SVIP-204ENST00000530199 GABRQQ9UN88 632 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 MAPRE3Q9UPY8 281 aa8.66□□□□□ -1.02
SVIP-204ENST00000530199 RRP7AQ9Y3A4 280 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms