RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, human

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSF1R-208	ENST00000515239	SLC39A11	Q8N1S5	342 aa		13.56	□□□□□ -0.24
CSF1R-208	ENST00000515239	TNPO1	Q92973	898 aa	Known RBP	13.56	□□□□□ -0.24
CSF1R-208	ENST00000515239	ACSF2	Q96CM8	615 aa	Predicted RBP	13.56	□□□□□ -0.24
CSF1R-208	ENST00000515239	CDHR1	Q96JP9	859 aa		13.56	□□□□□ -0.24
CSF1R-208	ENST00000515239	PKD2L1	Q9P0L9	805 aa		13.56	□□□□□ -0.24
CSF1R-208	ENST00000515239	GINS2	Q9Y248	185 aa		13.56	□□□□□ -0.24
CSF1R-208	ENST00000515239	MAP1B	P46821	2468 aa	Known RBP	13.56	□□□□□ -0.24
CSF1R-208	ENST00000515239	FANCM	Q8IYD8	2048 aa		13.56	□□□□□ -0.24
CSF1R-208	ENST00000515239	CFAP47	Q6ZTR5	3102 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	PIK3CD	O00329	1044 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	STK25	O00506	426 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	GPR182	O15218	404 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	TMC5	Q6UXY8	1006 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	OTOP3	Q7RTS5	596 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	SMARCC2	Q8TAQ2	1214 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	SLC22A17	Q8WUG5	538 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	UBAC1	Q9BSL1	405 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	DZANK1	Q9NVP4	752 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	DLGAP2	Q9P1A6	1054 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	CHD6	Q8TD26	2715 aa		13.55	□□□□□ -0.24
CSF1R-208	ENST00000515239	CACNA1I	Q9P0X4	2223 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	KLRC1	P26715	233 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	PDE1A	P54750	535 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	TBC1D8B	Q0IIM8	1120 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	GRM4	Q14833	912 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	ST3GAL2	Q16842	350 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	ODR4	Q5SWX8	454 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	PLPPR4	Q7Z2D5	763 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	GPR149	Q86SP6	731 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	FAM228A	Q86W67	206 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	AUTS2	Q8WXX7	1259 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	KRT23	Q9C075	422 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	AZI2	Q9H6S1	392 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	IGSF9	Q9P2J2	1179 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	PCDHB15	Q9Y5E8	787 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	UBIAD1	Q9Y5Z9	338 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	IRAK3	Q9Y616	596 aa		13.54	□□□□□ -0.24
CSF1R-208	ENST00000515239	DENND4A	Q7Z401	1863 aa		13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	NT5C1B-RDH14	C9J2C7	533 aa		13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	MAFG	O15525	162 aa		13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	CFH	P08603	1231 aa		13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	STAT5B	P51692	787 aa		13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	ZC3H14	Q6PJT7	736 aa	Known RBP	13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	CYB5R4	Q7L1T6	521 aa		13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	C1orf210	Q8IVY1	113 aa		13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	LRRC43	Q8N309	656 aa		13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	RSAD2	Q8WXG1	361 aa		13.53	□□□□□ -0.24
CSF1R-208	ENST00000515239	HOXA2	O43364	376 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	N4BP1	O75113	896 aa	Known RBP	13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	DCN	P07585	359 aa	Known RBP	13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	MFAP1	P55081	439 aa	Known RBP	13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	MTMR1	Q13613	665 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	BMS1	Q14692	1282 aa	Known RBP	13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	CLLU1OS	Q5K130	101 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	SPECC1	Q5M775	1068 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	KIAA0319	Q5VV43	1072 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	CCDC149	Q6ZUS6	474 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	CABP7	Q86V35	215 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	VPS52	Q8N1B4	723 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	PIBF1	Q8WXW3	757 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	CUL5	Q93034	780 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	ZBP1	Q9H171	429 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	TBC1D17	Q9HA65	648 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	SENP2	Q9HC62	589 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	JPH1	Q9HDC5	661 aa	Predicted RBP	13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	JADE2	Q9NQC1	790 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	SLC9A2	Q9UBY0	812 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	BAHCC1	Q9P281	2608 aa		13.52	□□□□□ -0.25
CSF1R-208	ENST00000515239	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	ATG7	O95352	703 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	SDS	P20132	328 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	SDHB	P21912	280 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	CA8	P35219	290 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	CRYBB1	P53674	252 aa	Predicted RBP	13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	ACTR2	P61160	394 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	TROAP	Q12815	778 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	KIZ	Q2M2Z5	673 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	LETM2	Q2VYF4	491 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	TMEM173	Q86WV6	379 aa	Predicted RBP	13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	SLC44A3	Q8N4M1	653 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	OSMR	Q99650	979 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	CNNM2	Q9H8M5	875 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	RCAN3	Q9UKA8	241 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	CA14	Q9ULX7	337 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	SIT1	Q9Y3P8	196 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	CHD8	Q9HCK8	2581 aa		13.51	□□□□□ -0.25
CSF1R-208	ENST00000515239	LAMA4	Q16363	1823 aa		13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	DCDC2B	A2VCK2	349 aa		13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	POTEM	A6NI47	508 aa		13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	ZBTB42	B2RXF5	422 aa		13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	GPR32	O75388	356 aa		13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	GLUL	P15104	373 aa		13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	ALDH7A1	P49419	539 aa	Known RBP	13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	METAP2	P50579	478 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	BCAR1	P56945	870 aa		13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	GIT2	Q14161	759 aa		13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	IMMT	Q16891	758 aa	Known RBP	13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	VARS2	Q5ST30	1063 aa	Known RBP	13.5	□□□□□ -0.25
CSF1R-208	ENST00000515239	ANKRD45	Q5TZF3	282 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms