RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 MT-CO1P00395 513 aa7□□□□□ -1.29
HMGCS1-207ENST00000514610 ADCY2Q08462 1091 aa7□□□□□ -1.29
HMGCS1-207ENST00000514610 NOLC1Q14978 699 aaKnown RBP eCLIP7□□□□□ -1.29
HMGCS1-207ENST00000514610 RAVER1Q8IY67 606 aaKnown RBP7□□□□□ -1.29
HMGCS1-207ENST00000514610 CALML6Q8TD86 181 aa7□□□□□ -1.29
HMGCS1-207ENST00000514610 ZCCHC14Q8WYQ9 949 aaKnown RBP7□□□□□ -1.29
HMGCS1-207ENST00000514610 PWWP2AQ96N64 755 aa7□□□□□ -1.29
HMGCS1-207ENST00000514610 TMPRSS11EQ9UL52 423 aa7□□□□□ -1.29
HMGCS1-207ENST00000514610 CNOT6Q9ULM6 557 aaKnown RBP7□□□□□ -1.29
HMGCS1-207ENST00000514610 ALDH1L1O75891 902 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 FBXO21O94952 628 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 TSPAN15O95858 294 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 KNG1P01042 644 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 CD83Q01151 205 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 CT83Q5H943 113 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 ODR4Q5SWX8 454 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 KIAA1841Q6NSI8 718 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 TIGD7Q6NT04 549 aaPredicted RBP6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 CCDC62Q6P9F0 684 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 SAPCD2Q86UD0 394 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 LYSMD2Q8IV50 215 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 ZNF526Q8TF50 670 aaPredicted RBP6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 ORAI2Q96SN7 254 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 CEP89Q96ST8 783 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 PPP1R16BQ96T49 567 aa6.99□□□□□ -1.29
HMGCS1-207ENST00000514610 S100BP04271 92 aaPredicted RBP6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 MYBL2P10244 700 aa6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 ZNF28P17035 718 aa6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 APEX1P27695 318 aaKnown RBP6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 LINC00310P59036 64 aa6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 TTF1Q15361 905 aaPredicted RBP6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 FSCN1Q16658 493 aaKnown RBP6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 PITRM1Q5JRX3 1037 aa6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 ADGRG2Q8IZP9 1017 aa6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 C1orf162Q8NEQ5 155 aaPredicted RBP6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 FERMT2Q96AC1 680 aa6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 DACT3Q96B18 629 aaPredicted RBP6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 EAF2Q96CJ1 260 aaPredicted RBP6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 ACAP3Q96P50 834 aa6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 WRNIP1Q96S55 665 aa6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 CCM2LQ9NUG4 571 aaPredicted RBP6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 WASHC2AQ641Q2 1341 aa6.98□□□□□ -1.29
HMGCS1-207ENST00000514610 LPLP06858 475 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 PFKMP08237 780 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 CELA3BP08861 270 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 ENPP1P22413 925 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 ADCY8P40145 1251 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 NEK2P51955 445 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 MCL1Q07820 350 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 TRIM25Q14258 630 aaKnown RBP6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 PCBP2Q15366 365 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 FUBP3Q96I24 572 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 SLC38A3Q99624 504 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 PITHD1Q9GZP4 211 aaPredicted RBP6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 MTG2Q9H4K7 406 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 DENND2AQ9ULE3 1009 aa6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 G3BP2Q9UN86 482 aaKnown RBP6.97□□□□□ -1.29
HMGCS1-207ENST00000514610 A0A1B0GTL3 188 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 TRIM75PA6NK02 468 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 NPIPB6E9PJ23 425 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 FFAR3O14843 346 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 PCDHGA12O60330 932 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 MAFO75444 373 aaPredicted RBP6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 RPL13P26373 211 aaKnown RBP6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 IL13P35225 146 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 SRSF2Q01130 221 aaKnown RBP6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 PTPN21Q16825 1174 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 WDR72Q3MJ13 1102 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 TRMT10BQ6PF06 316 aaKnown RBP6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 CXXC5Q7LFL8 322 aaKnown RBP6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 SLC41A1Q8IVJ1 513 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 BCL6BQ8N143 479 aaPredicted RBP6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 BHLHE22Q8NFJ8 381 aaPredicted RBP6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 MAGEL2Q9UJ55 1249 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 EDARQ9UNE0 448 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 PCDHGA9Q9Y5G4 932 aaKnown RBP6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 PCDHGA8Q9Y5G5 932 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 PCDHGA7Q9Y5G6 932 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 PCDHGA6Q9Y5G7 932 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 PCDHGA3Q9Y5H0 932 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 PCDHGA2Q9Y5H1 932 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 MYPNQ86TC9 1320 aa6.96□□□□□ -1.3
HMGCS1-207ENST00000514610 SHTN1A0MZ66 631 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 DDX3XO00571 662 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 OPHN1O60890 802 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 KLHL18O94889 574 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 PCDH8O95206 1070 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 CHGBP05060 677 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 RBP3P10745 1247 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 BCAR1P56945 870 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 ANTXR2P58335 489 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 CAP1Q01518 475 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 ZNF124Q15973 351 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 KCNA10Q16322 511 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 UGT8Q16880 541 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 PGM2L1Q6PCE3 622 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 DPP8Q6V1X1 898 aaPredicted RBP6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 KCNK18Q7Z418 384 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 NUDT10Q8NFP7 164 aa6.95□□□□□ -1.3
HMGCS1-207ENST00000514610 OR5AN1Q8NGI8 311 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms