RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 GOLGA6L7A0A1B0GV03 622 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 FAM187AA6NFU0 413 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L15C9J2P7 530 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L13C9JLJ4 530 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L11C9JVI0 530 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L18D6R9N7 530 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L22D6RA61 530 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L17D6RBQ6 530 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L19D6RCP7 530 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L20D6RJB6 530 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 LMNB1P20700 586 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 DRD4P21917 467 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 TMOD1P28289 359 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 DHX9Q08211 1270 aaKnown RBP12.58□□□□□ -0.4
SNX25-205ENST00000512853 PDE4CQ08493 712 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L24Q0WX57 530 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 PTPROQ16827 1216 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 KRT71Q3SY84 523 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 CRY2Q49AN0 593 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 Q4G0T1 1027 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 ANKRD20A8PQ5CZ79 823 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 USP17L6PQ6QN14 398 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 RPAINQ86UA6 219 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 CACNA2D3Q8IZS8 1091 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 PSMD1Q99460 953 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 OSBPL7Q9BZF2 842 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 DDX4Q9NQI0 724 aaKnown RBP12.58□□□□□ -0.4
SNX25-205ENST00000512853 KLC4Q9NSK0 619 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 SERPINB13Q9UIV8 391 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 DNM3Q9UQ16 869 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 DAAM1Q9Y4D1 1078 aa12.58□□□□□ -0.4
SNX25-205ENST00000512853 ADAMTSL1Q8N6G6 1762 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 ZMYM2Q9UBW7 1377 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 EIF3DO15371 548 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNX25-205ENST00000512853 BUB1BO60566 1050 aaPredicted RBP12.57□□□□□ -0.4
SNX25-205ENST00000512853 NUDT17P0C025 328 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 GHRP10912 638 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 SOX5P35711 763 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 CASP4P49662 377 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 MAGOHP61326 146 aaKnown RBP12.57□□□□□ -0.4
SNX25-205ENST00000512853 PSMC6P62333 389 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 ARHGAP4P98171 946 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 PABPC4Q13310 644 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNX25-205ENST00000512853 PICALMQ13492 652 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 DCAF12L1Q5VU92 463 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 DUPD1Q68J44 220 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 HOOK3Q86VS8 718 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 MAGOHBQ96A72 148 aaKnown RBP12.57□□□□□ -0.4
SNX25-205ENST00000512853 FMO2Q99518 471 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 TACO1Q9BSH4 297 aaKnown RBP12.57□□□□□ -0.4
SNX25-205ENST00000512853 CELF4Q9BZC1 486 aaKnown RBP12.57□□□□□ -0.4
SNX25-205ENST00000512853 CARD9Q9H257 536 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 OLFML3Q9NRN5 406 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 FRMPD4Q14CM0 1322 aa12.57□□□□□ -0.4
SNX25-205ENST00000512853 RBBP6Q7Z6E9 1792 aaKnown RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 EVI5O60447 810 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 GAP43P17677 238 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 CDR1P51861 262 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 CLUL1Q15846 466 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 ERMARDQ5T6L9 678 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 TCERG1LQ5VWI1 586 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 GJB7Q6PEY0 223 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 KCTD1Q719H9 257 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 PTF1AQ7RTS3 328 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 PROCA1Q8NCQ7 364 aaPredicted RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 RPGRQ92834 1020 aaKnown RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 LENG9Q96B70 501 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 TRIM51Q9BSJ1 452 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 FAM129AQ9BZQ8 928 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 DPH5Q9H2P9 285 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 EPB41L4BQ9H329 900 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 ZDHHC18Q9NUE0 388 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNX25-205ENST00000512853 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNX25-205ENST00000512853 IGSF9BQ9UPX0 1349 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 DCDC2CA8MYV0 355 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 MEIS2O14770 477 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 TBCAO75347 108 aaKnown RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 FGGP02679 453 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 DHX34Q14147 1143 aaKnown RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 PLS1Q14651 629 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 SPRED3Q2MJR0 410 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 PREPLQ4J6C6 727 aaPredicted RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 FMNL3Q8IVF7 1028 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 DCAF4Q8WV16 495 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 CCDC114Q96M63 670 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 FAM20AQ96MK3 541 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 XPO6Q96QU8 1125 aaKnown RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 UIMC1Q96RL1 719 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 MKNK1Q9BUB5 465 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 POLR3CQ9BUI4 534 aaPredicted RBP12.56□□□□□ -0.4
SNX25-205ENST00000512853 RUSC1Q9BVN2 902 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 STK33Q9BYT3 514 aa12.56□□□□□ -0.4
SNX25-205ENST00000512853 VAV3Q9UKW4 847 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms