RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 CEP55Q53EZ4 464 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 SPECC1Q5M775 1068 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 PCNX4Q63HM2 1172 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 SHC4Q6S5L8 630 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 PLA2G4DQ86XP0 818 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 TMEM105Q8N8V8 129 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 DNERQ8NFT8 737 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 AK8Q96MA6 479 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 FAM20AQ96MK3 541 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 MBOAT7Q96N66 472 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 MTMR9Q96QG7 549 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 IWS1Q96ST2 819 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 RAD9AQ99638 391 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 MXRA8Q9BRK3 442 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 DDX19AQ9NUU7 478 aaKnown RBP11.09□□□□□ -0.63
PTPN20-225ENST00000511769 PCDHA12Q9UN75 941 aa11.09□□□□□ -0.63
PTPN20-225ENST00000511769 RIF1Q5UIP0 2472 aaKnown RBP11.08□□□□□ -0.64
PTPN20-225ENST00000511769 FAM86B1E9PN63 330 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 NR1I2O75469 434 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 STAM2O75886 525 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 CABYRO75952 493 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 FAM86B2P0C5J1 330 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 PFKFB1P16118 471 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 UBA7P41226 1012 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 SYKP43405 635 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 NDUFA8P51970 172 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 PSMC6P62333 389 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 SETQ01105 290 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-225ENST00000511769 ACVR2BQ13705 512 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 PDIA5Q14554 519 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 PGM5Q15124 567 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 RSPO4Q2I0M5 234 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-225ENST00000511769 CCDC183Q5T5S1 534 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPN20-225ENST00000511769 NIPA1Q7RTP0 329 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 NLRX1Q86UT6 975 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 CCDC34Q96HJ3 373 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 RIPOR3Q96MK2 946 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 HINFPQ9BQA5 517 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 PDCD2LQ9BRP1 358 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 PYM1Q9BRP8 204 aaKnown RBP11.08□□□□□ -0.64
PTPN20-225ENST00000511769 GZF1Q9H116 711 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-225ENST00000511769 TTC12Q9H892 705 aaPredicted RBP11.08□□□□□ -0.64
PTPN20-225ENST00000511769 TRMT13Q9NUP7 481 aaKnown RBP11.08□□□□□ -0.64
PTPN20-225ENST00000511769 DACT1Q9NYF0 836 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 KCNH3Q9ULD8 1083 aa11.08□□□□□ -0.64
PTPN20-225ENST00000511769 CHD6Q8TD26 2715 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 MYH7BA7E2Y1 1941 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 LOC730098B7Z3J9 87 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 MEIS1O00470 390 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 MAFGO15525 162 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 ZNF202O95125 648 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 GJB5O95377 273 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 NR3C2P08235 984 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 GRIN1Q05586 938 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 STXBP2Q15833 593 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 IL17AQ16552 155 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 CCDC144BQ3MJ40 725 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 FAM117BQ6P1L5 589 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 RASSF8Q8NHQ8 419 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
PTPN20-225ENST00000511769 ZNF577Q9BSK1 485 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 GOLPH3LQ9H4A5 285 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 KCNMB3Q9NPA1 279 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 JADE2Q9NQC1 790 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 LRWD1Q9UFC0 647 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 CCDC39Q9UFE4 941 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 CD207Q9UJ71 328 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 HOOK1Q9UJC3 728 aaKnown RBP11.07□□□□□ -0.64
PTPN20-225ENST00000511769 STK24Q9Y6E0 443 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 FRMPD4Q14CM0 1322 aa11.07□□□□□ -0.64
PTPN20-225ENST00000511769 TPRP12270 2363 aaKnown RBP11.06□□□□□ -0.64
PTPN20-225ENST00000511769 IGLV3-22A0A075B6J6 115 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 FAM237AA0A1B0GTK4 181 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 MSH4O15457 936 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 POLR2DO15514 142 aaKnown RBP11.06□□□□□ -0.64
PTPN20-225ENST00000511769 IQCF3P0C7M6 154 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 CNTN2Q02246 1040 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 PDE4DQ08499 809 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 SNW1Q13573 536 aaKnown RBP11.06□□□□□ -0.64
PTPN20-225ENST00000511769 MTMR1Q13613 665 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 GNPTABQ3T906 1256 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 KANK3Q6NY19 840 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 FMR1NBQ8N0W7 255 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-225ENST00000511769 MSL3Q8N5Y2 521 aaKnown RBP11.06□□□□□ -0.64
PTPN20-225ENST00000511769 ENGASEQ8NFI3 743 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 CYP2W1Q8TAV3 490 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 HAS1Q92839 578 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 CALML4Q96GE6 196 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 EPSTI1Q96J88 318 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 TIGD1Q96MW7 591 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 SEZ6LQ9BYH1 1024 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 PANK2Q9BZ23 570 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 NUP62CLQ9H1M0 184 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 TNMDQ9H2S6 317 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 HPSEQ9Y251 543 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 UBIAD1Q9Y5Z9 338 aa11.06□□□□□ -0.64
PTPN20-225ENST00000511769 ZNFX1Q9P2E3 1918 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms