RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 XRN1Q8IZH2 1706 aaKnown RBP12.41□□□□□ -0.42
PCSK9-202ENST00000490692 NALCNQ8IZF0 1738 aa12.41□□□□□ -0.42
PCSK9-202ENST00000490692 CFAP69A5D8W1 941 aa12.41□□□□□ -0.42
PCSK9-202ENST00000490692 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
PCSK9-202ENST00000490692 SMIM22K7EJ46 135 aa12.41□□□□□ -0.42
PCSK9-202ENST00000490692 MAPK13O15264 365 aa12.41□□□□□ -0.42
PCSK9-202ENST00000490692 NVLO15381 856 aaKnown RBP12.41□□□□□ -0.42
PCSK9-202ENST00000490692 KCNH2Q12809 1159 aa12.41□□□□□ -0.42
PCSK9-202ENST00000490692 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
PCSK9-202ENST00000490692 SUPT20HQ8NEM7 779 aa12.41□□□□□ -0.42
PCSK9-202ENST00000490692 DUSP9Q99956 384 aaKnown RBP12.41□□□□□ -0.42
PCSK9-202ENST00000490692 ALG13Q9NP73 1137 aaKnown RBP12.41□□□□□ -0.42
PCSK9-202ENST00000490692 RASA4BC9J798 803 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 RASA4O43374 803 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 SEMA4AQ9H3S1 761 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 TFCP2L1Q9NZI6 479 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 MAFGO15525 162 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 CYP2D6P10635 497 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 PAX3P23760 479 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 RPL13P26373 211 aaKnown RBP12.4□□□□□ -0.42
PCSK9-202ENST00000490692 KCNQ4P56696 695 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 PTK2Q05397 1052 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 STRN3Q13033 797 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 SH3RF1Q7Z6J0 888 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 MYLK4Q86YV6 388 aaPredicted RBP12.4□□□□□ -0.42
PCSK9-202ENST00000490692 CEP63Q96MT8 703 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 CHCHD3Q9NX63 227 aaKnown RBP12.4□□□□□ -0.42
PCSK9-202ENST00000490692 GCNT4Q9P109 453 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 NBPF26B4DH59 902 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 GYG2O15488 501 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 GHRP10912 638 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 DNAJC3Q13217 504 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 CCDC174Q6PII3 467 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 NBPF15Q8N660 670 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 CCT6BQ92526 530 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 SLITRK6Q9H5Y7 841 aa12.4□□□□□ -0.42
PCSK9-202ENST00000490692 SSU72P8A0A1W2PR75 194 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 GAS8O95995 478 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 CDR2Q01850 454 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 KCNMA1Q12791 1236 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 USP4Q13107 963 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 KIAA1755Q5JYT7 1200 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 TMC3Q7Z5M5 1100 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 ZNF507Q8TCN5 953 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCSK9-202ENST00000490692 RILPQ96NA2 401 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 ASAP1Q9ULH1 1129 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 LTN1O94822 1766 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 DDAH1O94760 285 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 FAM13AO94988 1023 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 SLC9A1P19634 815 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 CYP4A11Q02928 519 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 LRRC63Q05C16 580 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 OLFML2BQ68BL8 750 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 ZNF746Q6NUN9 644 aaPredicted RBP12.39□□□□□ -0.43
PCSK9-202ENST00000490692 NSMFQ6X4W1 530 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 SPATA20Q8TB22 786 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 RGPD1P0DJD0 1748 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 NWD1Q149M9 1564 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 UBAP1LF5GYI3 381 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 MEIS1O00470 390 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 HNRNPCP07910 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCSK9-202ENST00000490692 VEGFAP15692 232 aaPredicted RBP12.39□□□□□ -0.43
PCSK9-202ENST00000490692 USP11P51784 963 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 ITIH3Q06033 890 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 CCDC152Q4G0S7 254 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 ZBTB38Q8NAP3 1195 aaPredicted RBP12.39□□□□□ -0.43
PCSK9-202ENST00000490692 MTRQ99707 1265 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 ZFP69BQ9UJL9 534 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 RPS6KL1Q9Y6S9 549 aa12.39□□□□□ -0.43
PCSK9-202ENST00000490692 FRMPD2Q68DX3 1309 aaPredicted RBP12.39□□□□□ -0.43
PCSK9-202ENST00000490692 DPPA5A6NC42 116 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 CHMP2AO43633 222 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 AGTP01019 485 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 MYL1P05976 194 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.437e-8■■□□□ 12
PCSK9-202ENST00000490692 PPP2R5EQ16537 467 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.38□□□□□ -0.432e-8■■□□□ 11.4
PCSK9-202ENST00000490692 NEUROG2Q9H2A3 272 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 SEMA6BQ9H3T3 888 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 ZNF711Q9Y462 761 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 USP17L3A6NCW0 530 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 USP17L4A6NCW7 530 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 ATP2A1O14983 1001 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 MGRN1O60291 552 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 PDE8AO60658 829 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 GSTA1P08263 222 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 IL2RBP14784 551 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 ATF2P15336 505 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 SGO2Q562F6 1265 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 MIS18BP1Q6P0N0 1132 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 CCDC137Q6PK04 289 aaKnown RBP12.38□□□□□ -0.43
PCSK9-202ENST00000490692 USP17L1Q7RTZ2 530 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 ARHGAP22Q7Z5H3 698 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 SPATA24Q86W54 205 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 JAMLQ86YT9 394 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 ANKRD35Q8N283 1001 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 EMILIN3Q9NT22 766 aa12.38□□□□□ -0.43
PCSK9-202ENST00000490692 PCDHA12Q9UN75 941 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms