RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 DMXL1Q9Y485 3027 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 TRIM43BA6NCK2 446 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 PALM3A6NDB9 673 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 CXCL11O14625 94 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 SLC26A4O43511 780 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 ATP8B1O43520 1251 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 PRDM1O75626 825 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 PLEKHA8P1O95397 391 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 ATP1A3P13637 1013 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 PRKCSHP14314 528 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 RAG1P15918 1043 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 UBA7P41226 1012 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 EPHB4P54760 987 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 RAB15P59190 212 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 MOGSQ13724 837 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 PUM1Q14671 1186 aaKnown RBP eCLIP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 KCNB1Q14721 858 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 TRIM60Q495X7 471 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 ZNF658Q5TYW1 1059 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 RRAGBQ5VZM2 374 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 DCAF15Q66K64 600 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 E4F1Q66K89 784 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 WWC2Q6AWC2 1192 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 RCSD1Q6JBY9 416 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 SLC39A5Q6ZMH5 540 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 TMTC1Q8IUR5 882 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 CNGA4Q8IV77 575 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 SMAP1Q8IYB5 467 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 CMTR1Q8N1G2 835 aaKnown RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 PDILTQ8N807 584 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 ZNF397Q8NF99 534 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 ADAM32Q8TC27 787 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 ZNF384Q8TF68 577 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 SOCS4Q8WXH5 440 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 LPAR1Q92633 364 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 TRIM43Q96BQ3 446 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 TEPSINQ96N21 525 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 NAP1L4Q99733 375 aaKnown RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 SPZ1Q9BXG8 430 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 CCSER1Q9C0I3 900 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 GLT8D2Q9H1C3 349 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 CD209Q9NNX6 404 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 FAM86C1Q9NVL1 165 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 ARGLU1Q9NWB6 273 aaPredicted RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 TRMT1Q9NXH9 659 aaKnown RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 BARHL2Q9NY43 387 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 LIMA1Q9UHB6 759 aaKnown RBP5.65□□□□□ -1.5
PTPRK-213ENST00000490332 GJD2Q9UKL4 321 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 JAG2Q9Y219 1238 aa5.65□□□□□ -1.5
PTPRK-213ENST00000490332 ITIH6Q6UXX5 1313 aa5.65□□□□□ -1.51
PTPRK-213ENST00000490332 VPS13AQ96RL7 3174 aa5.65□□□□□ -1.51
PTPRK-213ENST00000490332 GBF1Q92538 1859 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 MYH13Q9UKX3 1938 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 A0A087WWV3 80 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 CYP2D7A0A087X1C5 515 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 ESYT2A0FGR8 921 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 VWA3AA6NCI4 1184 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 KBTBD13C9JR72 458 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 KIAA0355O15063 1070 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 FGFR1OPO95684 399 aaKnown RBP5.64□□□□□ -1.51
PTPRK-213ENST00000490332 TUBBP07437 444 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 CLTBP09497 229 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 PARP1P09874 1014 aaKnown RBP5.64□□□□□ -1.51
PTPRK-213ENST00000490332 CCDC175P0C221 793 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 BMP6P22004 513 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 EEF1GP26641 437 aaKnown RBP5.64□□□□□ -1.51
PTPRK-213ENST00000490332 PRDX5P30044 214 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 CASQ1P31415 396 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 STAT6P42226 847 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 AFMP43652 599 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 CACNB2Q08289 660 aaPredicted RBP5.64□□□□□ -1.51
PTPRK-213ENST00000490332 PPIGQ13427 754 aaKnown RBP eCLIP5.64□□□□□ -1.513e-12■□□□□ 10.3
PTPRK-213ENST00000490332 CUL4BQ13620 913 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 BMS1Q14692 1282 aaKnown RBP5.64□□□□□ -1.51
PTPRK-213ENST00000490332 NPY5RQ15761 445 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 NBPF20Q3BBV1 942 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 FAM47AQ5JRC9 791 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 SPECC1Q5M775 1068 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 RASIP1Q5U651 963 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 CDKAL1Q5VV42 579 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 JAKMIP3Q5VZ66 844 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 PPP2R2DQ66LE6 453 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 MCTP2Q6DN12 878 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 PIK3AP1Q6ZUJ8 805 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 C16orf86Q6ZW13 317 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 ASCL5Q7RTU5 278 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 FAM114A1Q8IWE2 563 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 REXO1L1PQ8IX06 675 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 TEX11Q8IYF3 940 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 C4orf32Q8N8J7 132 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 ARRDC4Q8NCT1 418 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 MNS1Q8NEH6 495 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 LRRN4Q8WUT4 740 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 UBXN4Q92575 508 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 RRP36Q96EU6 259 aaKnown RBP5.64□□□□□ -1.51
PTPRK-213ENST00000490332 DHTKD1Q96HY7 919 aaPredicted RBP5.64□□□□□ -1.51
PTPRK-213ENST00000490332 EPSTI1Q96J88 318 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 PRMT6Q96LA8 375 aaPredicted RBP5.64□□□□□ -1.51
PTPRK-213ENST00000490332 TMEM47Q9BQJ4 181 aa5.64□□□□□ -1.51
PTPRK-213ENST00000490332 NUP58Q9BVL2 599 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms