RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 TNIP3Q96KP6 325 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 MRGPRX3Q96LB0 322 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 DHRS1Q96LJ7 313 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 TBATAQ96M53 351 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 TAAR9Q96RI9 348 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 MYD88Q99836 296 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 SPATA25Q9BR10 227 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 HDAC8Q9BY41 377 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 FOXP3Q9BZS1 431 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 KLHL25Q9H0H3 589 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 VTA1Q9NP79 307 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 TRMT13Q9NUP7 481 aaKnown RBP4.15□□□□□ -1.75
PRPF4-203ENST00000488937 PRR13Q9NZ81 148 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 APEX2Q9UBZ4 518 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 DNM3Q9UQ16 869 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 TSC22D4Q9Y3Q8 395 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 PMF1-BGLAPU3KQ54 211 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 IRS2Q9Y4H2 1338 aa4.15□□□□□ -1.75
PRPF4-203ENST00000488937 A0A1B0GVC2 190 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 A0A1W2PQ45 241 aaPredicted RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 A0A1W2PQY0 241 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 TRIM75PA6NK02 468 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 ZNF891A8MT65 544 aaPredicted RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 CBX4O00257 560 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 SHOXO15266 292 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 TBX1O43435 398 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 CBFA2T2O43439 604 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 PCDHGA12O60330 932 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 DLX3O60479 287 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 ULK1O75385 1050 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 FKBP9O95302 570 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 ZBED1O96006 694 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 MT-CO1P00395 513 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 EPHX1P07099 455 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 ZKSCAN1P17029 563 aaPredicted RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 LSSP48449 732 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 SCNN1BP51168 640 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 NCKAP1LP55160 1127 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 NANOS3P60323 173 aaKnown RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 RBM10P98175 930 aaKnown RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 DDX10Q13206 875 aaKnown RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 BIRC3Q13489 604 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 SNW1Q13573 536 aaKnown RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 NTRK3Q16288 839 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 HSF5Q4G112 596 aaPredicted RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 VWA3BQ502W6 1294 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 ANKRD39Q53RE8 183 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 PIK3R6Q5UE93 754 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 HEATR6Q6AI08 1181 aaKnown RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 IQSEC1Q6DN90 963 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 C16orf54Q6UWD8 224 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 LDHAL6AQ6ZMR3 332 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 UBE2R2Q712K3 238 aaPredicted RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 FKBP9P1Q75LS8 142 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 MAMDC2Q7Z304 686 aaPredicted RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 SUGP1Q8IWZ8 645 aaKnown RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 USHBP1Q8N6Y0 703 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 SLC35G2Q8TBE7 412 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 POF1BQ8WVV4 589 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 SMARCC1Q92922 1105 aaPredicted RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 HSPBAP1Q96EW2 488 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 SGCZQ96LD1 299 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 HAUS7Q99871 368 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 TNFRSF12AQ9NP84 129 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 EMC7Q9NPA0 242 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 NMRK2Q9NPI5 230 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 FNIP2Q9P278 1114 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 SAP30BPQ9UHR5 308 aaKnown RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 GJD2Q9UKL4 321 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 PCDHGB3Q9Y5G1 929 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 PCDHGA9Q9Y5G4 932 aaKnown RBP4.14□□□□□ -1.75
PRPF4-203ENST00000488937 PCDHGA8Q9Y5G5 932 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 PCDHGA7Q9Y5G6 932 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 PCDHGA6Q9Y5G7 932 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 PCDHGA3Q9Y5H0 932 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 PCDHGA2Q9Y5H1 932 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 DUSP10Q9Y6W6 482 aa4.14□□□□□ -1.75
PRPF4-203ENST00000488937 DYTNA2CJ06 578 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 FADS2P1A8MWK0 482 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 TPP1O14773 563 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 TCERG1O14776 1098 aaKnown RBP4.13□□□□□ -1.75
PRPF4-203ENST00000488937 TLR5O60602 858 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 HSPA6P17066 643 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 PRKCAP17252 672 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 CCND1P24385 295 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 AKAP5P24588 427 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 LIMS1P48059 325 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 TBX2Q13207 712 aaPredicted RBP4.13□□□□□ -1.75
PRPF4-203ENST00000488937 LONRF1Q17RB8 773 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 CCDC96Q2M329 555 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 RGL3Q3MIN7 710 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 PLEKHN1Q494U1 663 aaPredicted RBP4.13□□□□□ -1.75
PRPF4-203ENST00000488937 RRP12Q5JTH9 1297 aaKnown RBP4.13□□□□□ -1.75
PRPF4-203ENST00000488937 ABHD17CQ6PCB6 329 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 RPTNQ6XPR3 784 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 RINLQ6ZS11 566 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 C1orf122Q6ZSJ8 110 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 SRGAP1Q7Z6B7 1085 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 FNIP1Q8TF40 1166 aa4.13□□□□□ -1.75
PRPF4-203ENST00000488937 TCTN2Q96GX1 697 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms