RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 DKC1O60832 514 aaKnown RBP eCLIP11.96□□□□□ -0.49
TOP3B-216ENST00000487485 IQCF3P0C7M6 154 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 ACTN1P12814 892 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
TOP3B-216ENST00000487485 CDC25AP30304 524 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 KRT85P78386 507 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 GRIN1Q05586 938 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 PTPN11Q06124 597 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-216ENST00000487485 CTTNQ14247 550 aaKnown RBP11.96□□□□□ -0.49
TOP3B-216ENST00000487485 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 HERC6Q8IVU3 1022 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 TPH2Q8IWU9 490 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 ERMNQ8TAM6 284 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 PHOSPHO2Q8TCD6 241 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 NEK9Q8TD19 979 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 BBXQ8WY36 941 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-216ENST00000487485 TNPO1Q92973 898 aaKnown RBP11.96□□□□□ -0.49
TOP3B-216ENST00000487485 SLC9A7Q96T83 725 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 NRBP2Q9NSY0 501 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 FBXO2Q9UK22 296 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-216ENST00000487485 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 SRPRBQ9Y5M8 271 aaKnown RBP11.96□□□□□ -0.49
TOP3B-216ENST00000487485 STK24Q9Y6E0 443 aa11.96□□□□□ -0.49
TOP3B-216ENST00000487485 MORC2Q9Y6X9 1032 aaPredicted RBP11.96□□□□□ -0.49
TOP3B-216ENST00000487485 C17orf102A2RUQ5 167 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 PP2D1A8MPX8 630 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 PI4K2BG5E9Z4 385 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 RBAK-RBAKDNI3L0D1 243 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 HBP1O60381 514 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 PPP6R2O75170 966 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 MED24O75448 989 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 OATP04181 439 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 SPATA31C1P0DKV0 1188 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 INSRRP14616 1297 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 RPA1P27694 616 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 LONP1P36776 959 aaKnown RBP11.95□□□□□ -0.5
TOP3B-216ENST00000487485 CCT6AP40227 531 aaKnown RBP11.95□□□□□ -0.5
TOP3B-216ENST00000487485 PRKCEQ02156 737 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 KRT79Q5XKE5 535 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 HAUS3Q68CZ6 603 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 GDF6Q6KF10 455 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-216ENST00000487485 SESTD1Q86VW0 696 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 CATSPER3Q86XQ3 398 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 C4orf19Q8IY42 314 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 KRI1Q8N9T8 703 aaKnown RBP11.95□□□□□ -0.5
TOP3B-216ENST00000487485 ATP8B4Q8TF62 1192 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 AK8Q96MA6 479 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 CLIC6Q96NY7 704 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 LXNQ9BS40 222 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 POLR3CQ9BUI4 534 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-216ENST00000487485 CSRNP2Q9H175 543 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 ZSWIM4Q9H7M6 989 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 TUFT1Q9NNX1 390 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 SETD4Q9NVD3 440 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 WRAP73Q9P2S5 460 aaPredicted RBP11.95□□□□□ -0.5
TOP3B-216ENST00000487485 GTF2IRD1Q9UHL9 959 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 RCOR1Q9UKL0 485 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
TOP3B-216ENST00000487485 EVPLQ92817 2033 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 NRCAMQ92823 1304 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 LCHNA4D1U4 455 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 STBD1O95210 358 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 GNAT1P11488 350 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 RFC2P35250 354 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 IGBP1P78318 339 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 ZNF200P98182 395 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-216ENST00000487485 PPFIA1Q13136 1202 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 HIC1Q14526 733 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 GRIK4Q16099 956 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 XKR3Q5GH77 459 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 ZNF484Q5JVG2 852 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 ANO5Q75V66 913 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-216ENST00000487485 ALYREFQ86V81 257 aaKnown RBP11.94□□□□□ -0.5
TOP3B-216ENST00000487485 RETREG2Q8NC44 543 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 KCNG4Q8TDN1 519 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 SNX29Q8TEQ0 813 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 FAM167AQ96KS9 214 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 SPATA32Q96LK8 384 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 MMTAG2Q9BU76 263 aaKnown RBP11.94□□□□□ -0.5
TOP3B-216ENST00000487485 SCAND2PQ9GZW5 306 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-216ENST00000487485 SEPT9Q9UHD8 586 aaPredicted RBP11.94□□□□□ -0.5
TOP3B-216ENST00000487485 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
TOP3B-216ENST00000487485 A0A087WWV3 80 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 TMEM150BA6NC51 233 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 RRN3P2A6NIE6 340 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 ZBTB39O15060 712 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 LYPLA2O95372 231 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 MUTP22033 750 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 HOXC8P31273 242 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 YWHABP31946 246 aaKnown RBP11.93□□□□□ -0.5
TOP3B-216ENST00000487485 UBA7P41226 1012 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 ME1P48163 572 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 GPNMBQ14956 572 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 ECM1Q16610 540 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 PTGISQ16647 500 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms