RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ZNF577Q9BSK1 485 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 RAVER2Q9HCJ3 691 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 RTN4Q9NQC3 1192 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 RRAGDQ9NQL2 400 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 TLR9Q9NR96 1032 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 KCNH7Q9NS40 1196 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 SAMSN1Q9NSI8 373 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 SPTLC3Q9NUV7 552 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 ADD3Q9UEY8 706 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 NRBP1Q9UHY1 535 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 ZNF214Q9UL59 606 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 YBX2Q9Y2T7 364 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 REV3LO60673 3130 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CHD9Q3L8U1 2897 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 ITIH6Q6UXX5 1313 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 SYNRGQ9UMZ2 1314 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 NCOR2Q9Y618 2525 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 ATAD5Q96QE3 1844 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 LOC102724159A0A0B4J2E5 919 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 A0A0G2JLL6 359 aaPredicted RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 A0A1W2PQC6 194 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 EML1O00423 815 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 NFIBO00712 420 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 KIAA0355O15063 1070 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 GAS7O60861 476 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 OFD1O75665 1012 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 P4HBP07237 508 aaKnown RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 ARP10275 920 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 SKILP12757 684 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 GAP43P17677 238 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 CYP11B2P19099 503 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 SFPQP23246 707 aaKnown RBP eCLIP6□□□□□ -1.45
COL17A1-206ENST00000483876 SFNP31947 248 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 PBX1P40424 430 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 TERF1P54274 439 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 TLE2Q04725 743 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 PABPC4Q13310 644 aaKnown RBP eCLIP6□□□□□ -1.45
COL17A1-206ENST00000483876 GIT2Q14161 759 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 PUM1Q14671 1186 aaKnown RBP eCLIP6□□□□□ -1.45
COL17A1-206ENST00000483876 TMEM132BQ14DG7 1078 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 PGM5Q15124 567 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 PWP2Q15269 919 aaKnown RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 FAM110CQ1W6H9 321 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 CCDC144BQ3MJ40 725 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 ARSHQ5FYA8 562 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 TCP11X2Q5H9J9 407 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 MUM1L1Q5H9M0 696 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 GJC2Q5T442 439 aaPredicted RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 RASIP1Q5U651 963 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 ANKRD40Q6AI12 368 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 KLHL10Q6JEL2 608 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 KCNK18Q7Z418 384 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 PRRT2Q7Z6L0 340 aaPredicted RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 NLRX1Q86UT6 975 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 IRF2BP1Q8IU81 584 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 RIOX2Q8IUF8 465 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 TRMT44Q8IYL2 757 aaKnown RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 DNERQ8NFT8 737 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 TMEM174Q8WUU8 243 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 PBXIP1Q96AQ6 731 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 GPRASP2Q96D09 838 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 ATG4CQ96DT6 458 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 CCDC51Q96ER9 411 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 TAAR1Q96RJ0 339 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 RMDN3Q96TC7 470 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 EIF2AK1Q9BQI3 630 aaKnown RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 PDCD2LQ9BRP1 358 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 TEKT3Q9BXF9 490 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 KCNF1Q9H3M0 494 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 TMX1Q9H3N1 280 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 ACAD9Q9H845 621 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 AGO4Q9HCK5 861 aaKnown RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 PXMP2Q9NR77 195 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 RNF146Q9NTX7 359 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 PANK4Q9NVE7 773 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 COL20A1Q9P218 1284 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 DBR1Q9UK59 544 aaKnown RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 GDAQ9Y2T3 454 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 SLC45A1Q9Y2W3 748 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 PCDHA2Q9Y5H9 948 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6□□□□□ -1.45
COL17A1-206ENST00000483876 PTPRZ1P23471 2315 aaPredicted RBP6□□□□□ -1.45
COL17A1-206ENST00000483876 DOCK1Q14185 1865 aa6□□□□□ -1.45
COL17A1-206ENST00000483876 A0A0G2JMZ2 1700 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 DNAH12Q6ZR08 3092 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 SPDYE16A6NNV3 312 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 B4DLN1 442 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 KCNJ18B7U540 433 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 KBTBD13C9JR72 458 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 E9PMD0 336 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 STX10O60499 249 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 MSCO60682 206 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 DKC1O60832 514 aaKnown RBP eCLIP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 EIF3JO75822 258 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 GNA14O95837 355 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 SLC25A27O95847 323 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 TPM2P07951 284 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 NR3C2P08235 984 aa5.99□□□□□ -1.45
COL17A1-206ENST00000483876 MAPTP10636 758 aaKnown RBP5.99□□□□□ -1.45
COL17A1-206ENST00000483876 XRCC5P13010 732 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms