RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 UBN1Q9NPG3 1134 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 IRAK4Q9NWZ3 460 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 MKS1Q9NXB0 559 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 KCNK4Q9NYG8 393 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 CFDP1Q9UEE9 299 aaPredicted RBP6.78□□□□□ -1.32
RTF1-203ENST00000473214 CCDC39Q9UFE4 941 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 PCDHB10Q9UN67 800 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 JAG2Q9Y219 1238 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 PCDHB5Q9Y5E4 795 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 SLC12A7Q9Y666 1083 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 PLXNC1O60486 1568 aa6.78□□□□□ -1.32
RTF1-203ENST00000473214 A0A1W2PP55 124 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 PRR19A6NJB7 356 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 B3GALNT1O75752 331 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 SLITRK5O94991 958 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 CFBP00751 764 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 APOA4P06727 396 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 SLC3A2P08195 630 aaKnown RBP6.77□□□□□ -1.33
RTF1-203ENST00000473214 CCDC159P0C7I6 412 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 NPTX2P47972 431 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 UBXN2AP68543 259 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 MAP2K1Q02750 393 aaPredicted RBP6.77□□□□□ -1.33
RTF1-203ENST00000473214 SLC14A2Q15849 920 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 FKBP15Q5T1M5 1219 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 COL13A1Q5TAT6 717 aaPredicted RBP6.77□□□□□ -1.33
RTF1-203ENST00000473214 INTS5Q6P9B9 1019 aaKnown RBP6.77□□□□□ -1.33
RTF1-203ENST00000473214 C16orf87Q6PH81 154 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 DSTYKQ6XUX3 929 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 NEK10Q6ZWH5 1172 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 ACAD11Q709F0 780 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 VSIG1Q86XK7 387 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 PTRH1Q86Y79 214 aaKnown RBP6.77□□□□□ -1.33
RTF1-203ENST00000473214 ESX1Q8N693 406 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 ADAMTS18Q8TE60 1221 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 UCMAQ8WVF2 138 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 KIAA1191Q96A73 305 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 JAKMIP2Q96AA8 810 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 LTV1Q96GA3 475 aaPredicted RBP6.77□□□□□ -1.33
RTF1-203ENST00000473214 ASB2Q96Q27 587 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 BAG1Q99933 345 aaPredicted RBP6.77□□□□□ -1.33
RTF1-203ENST00000473214 ADPGKQ9BRR6 497 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 KATNAL1Q9BW62 490 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 TTLL2Q9BWV7 592 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 KRTAP4-9Q9BYQ8 210 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 ANTXR1Q9H6X2 564 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 C7orf69Q9H7B7 122 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 VTA1Q9NP79 307 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 ITM2CQ9NQX7 267 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 NSMCE4AQ9NXX6 385 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 MTRRQ9UBK8 725 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 ZNF112Q9UJU3 913 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 POLHQ9Y253 713 aa6.77□□□□□ -1.33
RTF1-203ENST00000473214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.77□□□□□ -1.33
RTF1-203ENST00000473214 NPHP4O75161 1426 aaPredicted RBP6.76□□□□□ -1.33
RTF1-203ENST00000473214 PREX2Q70Z35 1606 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 A0A087WV62 115 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 MASP2O00187 686 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 IPO8O15397 1037 aaKnown RBP6.76□□□□□ -1.33
RTF1-203ENST00000473214 CILPO75339 1184 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 TBC1D8O95759 1140 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 TNNT3P45378 269 aaPredicted RBP6.76□□□□□ -1.33
RTF1-203ENST00000473214 ATP11AP98196 1134 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 ICA1Q05084 483 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 TMED1Q13445 227 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 SPARCL1Q14515 664 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 ASIC2Q16515 512 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 TRIM61Q5EBN2 209 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 METTL24Q5JXM2 366 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 DGKKQ5KSL6 1271 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 RNF43Q68DV7 783 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 ADAMTSL4Q6UY14 1074 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 NFXL1Q6ZNB6 911 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 KIAA1211Q6ZU35 1233 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 SYDE1Q6ZW31 735 aaPredicted RBP6.76□□□□□ -1.33
RTF1-203ENST00000473214 DTX1Q86Y01 620 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 C1orf127Q8N9H9 656 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 UTP4Q969X6 686 aaKnown RBP6.76□□□□□ -1.33
RTF1-203ENST00000473214 PPP1R16BQ96T49 567 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 ACO2Q99798 780 aaKnown RBP6.76□□□□□ -1.33
RTF1-203ENST00000473214 ZWILCHQ9H900 591 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 CERS4Q9HA82 394 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 SLC52A2Q9HAB3 445 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 ABCB6Q9NP58 842 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 LATS2Q9NRM7 1088 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 ABCF3Q9NUQ8 709 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 DZANK1Q9NVP4 752 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 HERC5Q9UII4 1024 aaKnown RBP6.76□□□□□ -1.33
RTF1-203ENST00000473214 IQGAP1P46940 1657 aa6.76□□□□□ -1.33
RTF1-203ENST00000473214 ZC3H13Q5T200 1668 aaKnown RBP6.75□□□□□ -1.33
RTF1-203ENST00000473214 SYNMO15061 1565 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 HMX2A2RU54 273 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 A6NLC8 198 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 TMEM110-MUSTN1A8MSY1 372 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 KIF5CO60282 957 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 ZBED4O75132 1171 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 SLC4A1P02730 911 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 HRGP04196 525 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 DHRS4L1P0CG22 281 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 ATP1A3P13637 1013 aa6.75□□□□□ -1.33
RTF1-203ENST00000473214 KRT10P13645 584 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms