RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 DDX25Q9UHL0 483 aaKnown RBP7.47□□□□□ -1.21
VAMP3-202ENST00000470357 FBXO2Q9UK22 296 aaPredicted RBP7.47□□□□□ -1.21
VAMP3-202ENST00000470357 PLXNB2O15031 1838 aa7.47□□□□□ -1.21
VAMP3-202ENST00000470357 FRMPD4Q14CM0 1322 aa7.47□□□□□ -1.21
VAMP3-202ENST00000470357 PLXNA1Q9UIW2 1896 aa7.47□□□□□ -1.21
VAMP3-202ENST00000470357 CDH23Q9H251 3354 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 SERTM1A2A2V5 107 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 NFIBO00712 420 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 ATP4AP20648 1035 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 CCND2P30279 289 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 HOXA13P31271 388 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-202ENST00000470357 SYKP43405 635 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 RPS6P62753 249 aaKnown RBP7.46□□□□□ -1.22
VAMP3-202ENST00000470357 UBXN2AP68543 259 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 GAS6Q14393 721 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 PDIA5Q14554 519 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 LRIT3Q3SXY7 679 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 Q4G0T1 1027 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 ARSJQ5FYB0 599 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-202ENST00000470357 MUM1L1Q5H9M0 696 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 SH3PXD2AQ5TCZ1 1133 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 PCNX4Q63HM2 1172 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 KANK3Q6NY19 840 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 CAVIN1Q6NZI2 390 aaKnown RBP7.46□□□□□ -1.22
VAMP3-202ENST00000470357 NSMFQ6X4W1 530 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 ANKRD35Q8N283 1001 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 GPRC5AQ8NFJ5 357 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 FAM200AQ8TCP9 573 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 GPT2Q8TD30 523 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 SYTL5Q8TDW5 730 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-202ENST00000470357 NSUN6Q8TEA1 469 aaKnown RBP7.46□□□□□ -1.22
VAMP3-202ENST00000470357 TIGD1Q96MW7 591 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 IWS1Q96ST2 819 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 RMDN3Q96TC7 470 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 PAGR1Q9BTK6 254 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 NUP62CLQ9H1M0 184 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 PAK6Q9NQU5 681 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-202ENST00000470357 HOMER2Q9NSB8 354 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 MORF4L1Q9UBU8 362 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 HCN4Q9Y3Q4 1203 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 ALPK3Q96L96 1907 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 RPTORQ8N122 1335 aa7.46□□□□□ -1.22
VAMP3-202ENST00000470357 TTC28Q96AY4 2481 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 LCTP09848 1927 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 VWA3AA6NCI4 1184 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 ADAMTS3O15072 1205 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 MAFGO15525 162 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 STRNO43815 780 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 CYP2C8P10632 490 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 FCER1AP12319 257 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 PFKFB1P16118 471 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
VAMP3-202ENST00000470357 UBA7P41226 1012 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 FLT3LGP49771 235 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 ERVK-24P63145 666 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 KCTD2Q14681 263 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 FAM110CQ1W6H9 321 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 GNPTABQ3T906 1256 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 CEP55Q53EZ4 464 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 EFHC2Q5JST6 749 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 ARHGEF16Q5VV41 709 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 SHC4Q6S5L8 630 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 NCAPG2Q86XI2 1143 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 ELOA2Q8IYF1 753 aaPredicted RBP7.45□□□□□ -1.22
VAMP3-202ENST00000470357 FMR1NBQ8N0W7 255 aaPredicted RBP7.45□□□□□ -1.22
VAMP3-202ENST00000470357 ABRAQ8N0Z2 381 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 KCTD17Q8N5Z5 321 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 C4orf32Q8N8J7 132 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 C1orf216Q8TAB5 229 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 ERMNQ8TAM6 284 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 DIS3LQ8TF46 1054 aaKnown RBP7.45□□□□□ -1.22
VAMP3-202ENST00000470357 SCG3Q8WXD2 468 aaKnown RBP7.45□□□□□ -1.22
VAMP3-202ENST00000470357 PAWRQ96IZ0 340 aaKnown RBP7.45□□□□□ -1.22
VAMP3-202ENST00000470357 CDHR1Q96JP9 859 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 MTMR9Q96QG7 549 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 MOV10L1Q9BXT6 1211 aaKnown RBP7.45□□□□□ -1.22
VAMP3-202ENST00000470357 CCSER1Q9C0I3 900 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 CSRNP2Q9H175 543 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 TNMDQ9H2S6 317 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 CRISPLD1Q9H336 500 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 CUEDC2Q9H467 287 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 PXMP2Q9NR77 195 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 DACT1Q9NYF0 836 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 CYP39A1Q9NYL5 469 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 BTBD7Q9P203 1132 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 RBPJLQ9UBG7 517 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 CCDC39Q9UFE4 941 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 TCEAL9Q9UHQ7 104 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 KCNH3Q9ULD8 1083 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 PCDHA12Q9UN75 941 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 HPSEQ9Y251 543 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 IVNS1ABPQ9Y6Y0 642 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 ZNF236Q9UL36 1845 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 PRUNE2Q8WUY3 3088 aa7.45□□□□□ -1.22
VAMP3-202ENST00000470357 A0A1B0GVL5 298 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 A0A1W2PNR3 127 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 MEIS1O00470 390 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 ADCY3O60266 1144 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 ZNF202O95125 648 aa7.44□□□□□ -1.22
VAMP3-202ENST00000470357 TDP2O95551 362 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms