RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 LENG1Q96BZ8 264 aaPredicted RBP11□□□□□ -0.65
HCG27-202ENST00000414008 ZSCAN31Q96LW9 406 aaPredicted RBP11□□□□□ -0.65
HCG27-202ENST00000414008 WDR11Q9BZH6 1224 aa11□□□□□ -0.65
HCG27-202ENST00000414008 SPC25Q9HBM1 224 aa11□□□□□ -0.65
HCG27-202ENST00000414008 BRCA2P51587 3418 aa11□□□□□ -0.65
HCG27-202ENST00000414008 ESYT2A0FGR8 921 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 DNM1LO00429 736 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 ADCY6O43306 1168 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 CTDNEP1O95476 244 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 BRD2P25440 801 aaKnown RBP10.99□□□□□ -0.65
HCG27-202ENST00000414008 GNA11P29992 359 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 CCND2P30279 289 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 ARSDP51689 593 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 MLLT1Q03111 559 aaPredicted RBP10.99□□□□□ -0.65
HCG27-202ENST00000414008 LRRC41Q15345 812 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 GJC2Q5T442 439 aaPredicted RBP10.99□□□□□ -0.65
HCG27-202ENST00000414008 SEPT14Q6ZU15 432 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 NECAB2Q7Z6G3 386 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 UBE2Q1Q7Z7E8 422 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 RNF180Q86T96 592 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 CCDC148Q8NFR7 591 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 SCFD2Q8WU76 684 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 PAWRQ96IZ0 340 aaKnown RBP10.99□□□□□ -0.65
HCG27-202ENST00000414008 SLC30A3Q99726 388 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 ZMYND12Q9H0C1 365 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 C6orf50Q9HD87 102 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 SH3GLB2Q9NR46 395 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 VPS54Q9P1Q0 977 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 KLF15Q9UIH9 416 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 PCDHA6Q9UN73 950 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 GNEQ9Y223 722 aaKnown RBP10.99□□□□□ -0.65
HCG27-202ENST00000414008 Q9Y3F1 56 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 PCDHA8Q9Y5H6 950 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 FRMPD4Q14CM0 1322 aa10.99□□□□□ -0.65
HCG27-202ENST00000414008 SHISA8B8ZZ34 492 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 KBTBD13C9JR72 458 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 DYNC1LI2O43237 492 aaPredicted RBP10.98□□□□□ -0.65
HCG27-202ENST00000414008 SIN3BO75182 1162 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 STAM2O75886 525 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 FOSP01100 380 aaPredicted RBP10.98□□□□□ -0.65
HCG27-202ENST00000414008 C6orf222P0C671 652 aaPredicted RBP10.98□□□□□ -0.65
HCG27-202ENST00000414008 GJA9P57773 515 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 NLRP5P59047 1200 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 TTLL4Q14679 1199 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 GRIN2CQ14957 1233 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 DUSP28Q4G0W2 176 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 MCTP2Q6DN12 878 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 XRRA1Q6P2D8 792 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 IL31RAQ8NI17 732 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 BICD2Q8TD16 824 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 DIS3LQ8TF46 1054 aaKnown RBP10.98□□□□□ -0.65
HCG27-202ENST00000414008 WASF1Q92558 559 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 SAP130Q9H0E3 1048 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 AP5M1Q9H0R1 490 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 UPF3AQ9H1J1 476 aaKnown RBP10.98□□□□□ -0.65
HCG27-202ENST00000414008 C11orf49Q9H6J7 331 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 EHMT1Q9H9B1 1298 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 SH2B1Q9NRF2 756 aaPredicted RBP10.98□□□□□ -0.65
HCG27-202ENST00000414008 ORC3Q9UBD5 711 aaPredicted RBP10.98□□□□□ -0.65
HCG27-202ENST00000414008 STK36Q9NRP7 1315 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 SYNRGQ9UMZ2 1314 aa10.98□□□□□ -0.65
HCG27-202ENST00000414008 RBBP6Q7Z6E9 1792 aaKnown RBP10.98□□□□□ -0.65
HCG27-202ENST00000414008 LCTP09848 1927 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 MCM3APO60318 1980 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 NKRFO15226 690 aaKnown RBP eCLIP10.97□□□□□ -0.65
HCG27-202ENST00000414008 DTNBO60941 627 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 ADAMTS4O75173 837 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 TXNP10599 105 aaKnown RBP10.97□□□□□ -0.65
HCG27-202ENST00000414008 XBP1P17861 261 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 MCM2P49736 904 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 NKX3-2P78367 333 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 MRPS9P82933 396 aaKnown RBP10.97□□□□□ -0.65
HCG27-202ENST00000414008 AP3B2Q13367 1082 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 GNPTABQ3T906 1256 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 TMEM63BQ5T3F8 832 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 JAKMIP3Q5VZ66 844 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 PCNX4Q63HM2 1172 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 CCDC62Q6P9F0 684 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 KCNV1Q6PIU1 500 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 CAPN12Q6ZSI9 719 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 TLK2Q86UE8 772 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 CCDC83Q8IWF9 413 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 FAM177A1Q8N128 213 aaPredicted RBP10.97□□□□□ -0.65
HCG27-202ENST00000414008 BEND7Q8N7W2 519 aaPredicted RBP10.97□□□□□ -0.65
HCG27-202ENST00000414008 NSUN7Q8NE18 718 aaKnown RBP10.97□□□□□ -0.65
HCG27-202ENST00000414008 KLHDC9Q8NEP7 349 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 AIFM3Q96NN9 605 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 PNMA5Q96PV4 448 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 SENP6Q9GZR1 1112 aaPredicted RBP10.97□□□□□ -0.65
HCG27-202ENST00000414008 TMEM260Q9NX78 707 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 RTEL1Q9NZ71 1219 aa10.97□□□□□ -0.65
HCG27-202ENST00000414008 MYADML2A6NDP7 307 aa10.96□□□□□ -0.65
HCG27-202ENST00000414008 ARIH2O95376 493 aa10.96□□□□□ -0.65
HCG27-202ENST00000414008 TGFB3P10600 412 aa10.96□□□□□ -0.65
HCG27-202ENST00000414008 COL6A1P12109 1028 aa10.96□□□□□ -0.65
HCG27-202ENST00000414008 FDPSP14324 419 aaKnown RBP10.96□□□□□ -0.65
HCG27-202ENST00000414008 ALAS2P22557 587 aa10.96□□□□□ -0.65
HCG27-202ENST00000414008 PTGS1P23219 599 aa10.96□□□□□ -0.65
HCG27-202ENST00000414008 CST5P28325 142 aaPredicted RBP10.96□□□□□ -0.65
HCG27-202ENST00000414008 ST3GAL1Q11201 340 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms