RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TAF1CQ15572 869 aaPredicted RBP10.29□□□□□ -0.76
SNHG3-201ENST00000413987 MEI1Q5TIA1 1274 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 CDC42EP5Q6NZY7 148 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 PADI6Q6TGC4 694 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 PACS2Q86VP3 889 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 MB21D2Q8IYB1 491 aaPredicted RBP10.29□□□□□ -0.76
SNHG3-201ENST00000413987 STAG2Q8N3U4 1231 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 FAM26EQ8N5C1 309 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 TAB3Q8N5C8 712 aaPredicted RBP10.29□□□□□ -0.76
SNHG3-201ENST00000413987 TEKT1Q969V4 418 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 NLRC4Q9NPP4 1024 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 VPS18Q9P253 973 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 ABHD14A-ACY1A0A1B0GW23 586 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 TSPY2A6NKD2 308 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 ZBBXA8MT70 800 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 H3BQF6 201 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 CNOT4O95628 575 aaKnown RBP10.29□□□□□ -0.76
SNHG3-201ENST00000413987 TSPY3P0CV98 308 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 TSPY8P0CW00 308 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 XBP1P17861 261 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 GRK2P25098 689 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 DSG3P32926 999 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 ECE1P42892 770 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 GNG11P61952 73 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 TSPY1Q01534 308 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 CEBPZQ03701 1054 aaKnown RBP10.29□□□□□ -0.76
SNHG3-201ENST00000413987 ALX1Q15699 326 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 PERM1Q5SV97 790 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 C7orf61Q8IZ16 206 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 CEP112Q8N8E3 955 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 PRMT6Q96LA8 375 aaPredicted RBP10.29□□□□□ -0.76
SNHG3-201ENST00000413987 UROC1Q96N76 676 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 TDRD3Q9H7E2 651 aaKnown RBP10.29□□□□□ -0.76
SNHG3-201ENST00000413987 USP40Q9NVE5 1235 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 EPS15L1Q9UBC2 864 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 PCDHGC3Q9UN70 934 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 PPP2R2CQ9Y2T4 447 aa10.29□□□□□ -0.76
SNHG3-201ENST00000413987 ZNF541Q9H0D2 1346 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 CLRN2A0PK11 232 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 VWA3AA6NCI4 1184 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 NMT2O60551 498 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 JAK2O60674 1132 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 TIPRLO75663 272 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 ABLIM3O94929 683 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 RXRAP19793 462 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 HOXD12P35452 270 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 FAM47AQ5JRC9 791 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 AKNAD1Q5T1N1 836 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 DHX32Q7L7V1 743 aaKnown RBP10.28□□□□□ -0.76
SNHG3-201ENST00000413987 RALYLQ86SE5 291 aaKnown RBP10.28□□□□□ -0.76
SNHG3-201ENST00000413987 FAM71BQ8TC56 605 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 POF1BQ8WVV4 589 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 ZBTB9Q96C00 473 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 HINFPQ9BQA5 517 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 FBRSQ9HAH7 460 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 ANKEF1Q9NU02 776 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 ZSWIM5Q9P217 1185 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 ARHGAP28Q9P2N2 729 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 NAV1Q8NEY1 1877 aa10.28□□□□□ -0.76
SNHG3-201ENST00000413987 A0A087WUV0 522 aaPredicted RBP10.27□□□□□ -0.76
SNHG3-201ENST00000413987 TNFRSF21O75509 655 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 SLC3A2P08195 630 aaKnown RBP10.27□□□□□ -0.76
SNHG3-201ENST00000413987 FDX1P10109 184 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 TOP1P11387 765 aaKnown RBP10.27□□□□□ -0.76
SNHG3-201ENST00000413987 EIF4BP23588 611 aaKnown RBP10.27□□□□□ -0.76
SNHG3-201ENST00000413987 GABREP78334 506 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 DDR2Q16832 855 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 DPCR1Q3MIW9 517 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 TUBB8Q3ZCM7 444 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 CFAP100Q494V2 611 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 MCTP2Q6DN12 878 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 CXorf57Q6NSI4 855 aaKnown RBP10.27□□□□□ -0.76
SNHG3-201ENST00000413987 MFSD6Q6ZSS7 791 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 TBC1D1Q86TI0 1168 aaPredicted RBP10.27□□□□□ -0.76
SNHG3-201ENST00000413987 TPH2Q8IWU9 490 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 NCOA7Q8NI08 942 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 USP28Q96RU2 1077 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 MYL10Q9BUA6 226 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 NCOA5Q9HCD5 579 aaKnown RBP10.27□□□□□ -0.76
SNHG3-201ENST00000413987 RAB21Q9UL25 225 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 ITM2BQ9Y287 266 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 SLC4A7Q9Y6M7 1214 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 ARFGEF1Q9Y6D6 1849 aa10.27□□□□□ -0.76
SNHG3-201ENST00000413987 STX10O60499 249 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 MSL3P1P0C860 447 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 MTHFD1P11586 935 aaKnown RBP10.27□□□□□ -0.77
SNHG3-201ENST00000413987 HOXD10P28358 340 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 WEE1P30291 646 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 USP8P40818 1118 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 INHBEP58166 350 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 CCDC15Q0P6D6 951 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 NCAPHQ15003 741 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 MTERF2Q49AM1 385 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 IRGCQ6NXR0 463 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 SRGAP1Q7Z6B7 1085 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 VSTM4Q8IW00 320 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 KCNG4Q8TDN1 519 aa10.27□□□□□ -0.77
SNHG3-201ENST00000413987 ERCC4Q92889 916 aaPredicted RBP10.27□□□□□ -0.77
SNHG3-201ENST00000413987 FAM163AQ96GL9 167 aaPredicted RBP10.27□□□□□ -0.77
SNHG3-201ENST00000413987 PDE11AQ9HCR9 933 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms