RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 PARP2Q9UGN5 583 aa5.9□□□□□ -1.46
PTPRD-205ENST00000397611 CNOT7Q9UIV1 285 aaKnown RBP5.9□□□□□ -1.46
PTPRD-205ENST00000397611 C4AP0C0L4 1744 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 C4BP0C0L5 1744 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 hCG_1642624A0A1W2PR95 340 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 CYP3A4P08684 503 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 GZMAP12544 262 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 CLK2P49760 499 aaKnown RBP5.9□□□□□ -1.47
PTPRD-205ENST00000397611 SMTNP53814 917 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 PLCB3Q01970 1234 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 GUCY1A3Q02108 690 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 RASSF7Q02833 373 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 STAG2Q8N3U4 1231 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 LRRC57Q8N9N7 239 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 CCDC134Q9H6E4 229 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 KCNMB3Q9NPA1 279 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 HDAC6Q9UBN7 1215 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 ASIC3Q9UHC3 531 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 HDAC9Q9UKV0 1011 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 TRIM49BA6NDI0 452 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 SNAP23O00161 211 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 ZBTB5O15062 677 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 GSTA1P08263 222 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 TM4SF1P30408 202 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 RASSF2P50749 326 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 FKBP1AP62942 108 aaKnown RBP5.9□□□□□ -1.47
PTPRD-205ENST00000397611 CCDC105Q8IYK2 499 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 SYCP3Q8IZU3 236 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 GSDMBQ8TAX9 411 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 CCHCR1Q8TD31 782 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 RIN2Q8WYP3 895 aaPredicted RBP5.9□□□□□ -1.47
PTPRD-205ENST00000397611 PCDHA12Q9UN75 941 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 CDK8P49336 464 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 RIPK1Q13546 671 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 DHX34Q14147 1143 aaKnown RBP5.9□□□□□ -1.47
PTPRD-205ENST00000397611 KIRREL3Q8IZU9 778 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 RFFLQ8WZ73 363 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 CUL5Q93034 780 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 OSBPL1AQ9BXW6 950 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 PPCSQ9HAB8 311 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 POLD4Q9HCU8 107 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 CD209Q9NNX6 404 aa5.9□□□□□ -1.47
PTPRD-205ENST00000397611 NOC2LQ9Y3T9 749 aaKnown RBP5.9□□□□□ -1.47
PTPRD-205ENST00000397611 XRCC5P13010 732 aaKnown RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 KRT26Q7Z3Y9 468 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 CMTR1Q8N1G2 835 aaKnown RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 DDX17Q92841 729 aaKnown RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 RPS6KC1Q96S38 1066 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 VCX3AQ9NNX9 186 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 HOMER3Q9NSC5 361 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 RPL26L1Q9UNX3 145 aaKnown RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 MYH7P12883 1935 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 SPOPO43791 374 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 HLA-DOAP06340 250 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 KRT15P19012 456 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 LMNB1P20700 586 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 CASP1P29466 404 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 PMS1P54277 932 aaKnown RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 ARHGAP24Q8N264 748 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 KCNN1Q92952 543 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 SUGCTQ9HAC7 445 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 EMILIN3Q9NT22 766 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 PPP1R9AQ9ULJ8 1098 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 GRIN2DO15399 1336 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 SUN1O94901 812 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 FTCDO95954 541 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 SLCO1A2P46721 670 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 HERC4Q5GLZ8 1057 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 NAA35Q5VZE5 725 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 CCDC13Q8IYE1 715 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 LSM14BQ9BX40 385 aaKnown RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 AMNQ9BXJ7 453 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 COA1Q9GZY4 146 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 GANQ9H2C0 597 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 H0Y3Z8 333 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 GHRP10912 638 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 PDHBP11177 359 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 DYMQ7RTS9 669 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 DHX38Q92620 1227 aaKnown RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 EPN3Q9H201 632 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 DONSONQ9NYP3 566 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 CTTNBP2NLQ9P2B4 639 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 USP20Q9Y2K6 914 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 TTLL1O95922 423 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 FOXR1Q6PIV2 292 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 CRELD2Q6UXH1 353 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 DCAF4Q8WV16 495 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 SLCO2A1Q92959 643 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 LRRC1Q9BTT6 524 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 RTCBQ9Y3I0 505 aaKnown RBP5.89□□□□□ -1.47
PTPRD-205ENST00000397611 CACNA1SQ13698 1873 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 RCCD1A6NED2 376 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 CYP11B2P19099 503 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 MAN1A1P33908 653 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 CFAP157Q5JU67 520 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 SGSM3Q96HU1 749 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 TIPINQ9BVW5 301 aa5.89□□□□□ -1.47
PTPRD-205ENST00000397611 VPS37BQ9H9H4 285 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms