RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 IGBP1P78318 339 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 KRT17Q04695 432 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 NFX1Q12986 1120 aaKnown RBP15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 CCDC178Q5BJE1 867 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 PCNX4Q63HM2 1172 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 ZNF589Q86UQ0 364 aaPredicted RBP15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 GIMAP8Q8ND71 665 aaPredicted RBP15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 ZNF558Q96NG5 402 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 SMARCAD1Q9H4L7 1026 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 MAD2L2Q9UI95 211 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 ST3GAL5Q9UNP4 418 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 DOCK8Q8NF50 2099 aa15.78■□□□□ 0.12
VCPKMT-201ENST00000395859 SETXQ7Z333 2677 aaKnown RBP15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 A0A0D9SFI3 127 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 DCNP07585 359 aaKnown RBP15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 CFHP08603 1231 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 KRT76Q01546 638 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 ZNF528Q3MIS6 628 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 TMC5Q6UXY8 1006 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 CCDC149Q6ZUS6 474 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 TRAPPC12Q8WVT3 735 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 FAM227BQ96M60 508 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 ZSCAN10Q96SZ4 725 aaPredicted RBP15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 ZBP1Q9H171 429 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 RNF41Q9H4P4 317 aaPredicted RBP15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 ATP6V0A4Q9HBG4 840 aa15.77■□□□□ 0.12
VCPKMT-201ENST00000395859 WDFY3Q8IZQ1 3526 aa15.77■□□□□ 0.11
VCPKMT-201ENST00000395859 LAMA4Q16363 1823 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 PALM3A6NDB9 673 aaPredicted RBP15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 TRIM6-TRIM34B2RNG4 842 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 KLRF2D3W0D1 207 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 SPTLC1O15269 473 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 KINO60870 393 aaKnown RBP15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 RPS6KA5O75582 802 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 IBSPP21815 317 aaPredicted RBP15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 LMNB2Q03252 620 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 LRRC43Q8N309 656 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 RSAD2Q8WXG1 361 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 GLG1Q92896 1179 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 RIOX1Q9H6W3 641 aa15.76■□□□□ 0.11
VCPKMT-201ENST00000395859 DENND3A2RUS2 1198 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 CYTH3O43739 400 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 HOXB3P14651 431 aaPredicted RBP15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 PLCB4Q15147 1175 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 LETM2Q2VYF4 491 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 MCMDC2Q4G0Z9 681 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 SLC44A3Q8N4M1 653 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 NELL1Q92832 810 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 GPRASP2Q96D09 838 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 CDV3Q9UKY7 258 aaKnown RBP15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 SIT1Q9Y3P8 196 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 PATJQ8NI35 1801 aa15.75■□□□□ 0.11
VCPKMT-201ENST00000395859 CXCL14O95715 111 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 SRFP11831 508 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 ITGB5P18084 799 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 CLLU1OSQ5K130 101 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 SPECC1Q5M775 1068 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 MTHFD1LQ6UB35 978 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 FAM228AQ86W67 206 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 KIAA0319LQ8IZA0 1049 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 ZBTB44Q8NCP5 570 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 PIGSQ96S52 555 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 CHMP4BQ9H444 224 aaKnown RBP15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 SFXN1Q9H9B4 322 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 ZSWIM5Q9P217 1185 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 EPS15L1Q9UBC2 864 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 CA14Q9ULX7 337 aa15.74■□□□□ 0.11
VCPKMT-201ENST00000395859 GPR182O15218 404 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 HOXA2O43364 376 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 LILRB5O75023 590 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 CTSAP10619 480 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 C15orf39Q6ZRI6 1047 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 NLRX1Q86UT6 975 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 TMEM173Q86WV6 379 aaPredicted RBP15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 GPR152Q8TDT2 470 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 AUTS2Q8WXX7 1259 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 EPC1Q9H2F5 836 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 PARD6AQ9NPB6 346 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 NCDNQ9UBB6 729 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 FBXO4Q9UKT5 387 aa15.73■□□□□ 0.11
VCPKMT-201ENST00000395859 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 PIK3CDO00329 1044 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 STK25O00506 426 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 MEIS2O14770 477 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 PAPLNO95428 1278 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 TRAF1Q13077 416 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 WTAPQ15007 396 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 SEC23AQ15436 765 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 PLPPR4Q7Z2D5 763 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 CABP7Q86V35 215 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 TICAM2Q86XR7 235 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 PJA1Q8NG27 643 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 EVI5LQ96CN4 794 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 RHOBTB2Q9BYZ6 727 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 ARHGEF3Q9NR81 526 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 PCDHGA2Q9Y5H1 932 aa15.72■□□□□ 0.11
VCPKMT-201ENST00000395859 PNMA6FA0A0J9YX94 578 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 B4E1Z4 1266 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 LRRN2O75325 713 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms