RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 FANCCQ00597 558 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ACTN3Q08043 901 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 FILIP1LQ4L180 1135 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ADGRF4Q8IZF3 695 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ZNF513Q8N8E2 541 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ENAHQ8N8S7 591 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CAGE1Q8TC20 777 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CCDC12Q8WUD4 166 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 EMID1Q96A84 441 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 SAAL1Q96ER3 474 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 PURBQ96QR8 312 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 AMNQ9BXJ7 453 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CAPS2Q9BXY5 557 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 WNT8AQ9H1J5 351 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 HMGB1P09429 215 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 IFIT1BQ5T764 474 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ATL3Q6DD88 541 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 VSTM4Q8IW00 320 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 SYTL5Q8TDW5 730 aaPredicted RBP12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 SLC9A7Q96T83 725 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 KATNAL1Q9BW62 490 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 KIF9Q9HAQ2 790 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ZSWIM5Q9P217 1185 aa12.56□□□□□ -0.4
TRAF3IP2-208ENST00000392556 B4E1Z4 1266 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 BAIAP3O94812 1187 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 SLC8A1P32418 973 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CCL23P55773 120 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 NCAPHQ15003 741 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 SNCBQ16143 134 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 WHAMMP3Q1A5X7 153 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 QRICH1Q2TAL8 776 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 USH1GQ495M9 461 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CCDC40Q4G0X9 1142 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 FAM177A1Q8N128 213 aaPredicted RBP12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ZKSCAN3Q9BRR0 538 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 UBA5Q9GZZ9 404 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 MYO6Q9UM54 1294 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 NOD1Q9Y239 953 aa12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
TRAF3IP2-208ENST00000392556 GOLGA8HP0CJ92 632 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 RBL2Q08999 1139 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 LAMC2Q13753 1193 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 TBC1D25Q3MII6 688 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 RMDN3Q96TC7 470 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 SH3GL2Q99962 352 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 TSPYL2Q9H2G4 693 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 GOLPH3LQ9H4A5 285 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 UMODL1Q5DID0 1318 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 AP1G2O75843 785 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 RAB27AP51159 221 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 HSD17B4P51659 736 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 SKOR1P84550 965 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 STIM1Q13586 685 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ANKRD1Q15327 319 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 DGKDQ16760 1214 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 FAM47CQ5HY64 1035 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ARHGEF16Q5VV41 709 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 OTOP2Q7RTS6 562 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 MTMR8Q96EF0 704 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 JMJD4Q9H9V9 463 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 TRMT13Q9NUP7 481 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 TPCN1Q9ULQ1 816 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 SCN10AQ9Y5Y9 1956 aa12.54□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ERICH2A1L162 156 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ZBTB5O15062 677 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 MMP3P08254 477 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ATP2A2P16615 1042 aaKnown RBP12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 TMEM63BQ5T3F8 832 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 OR8K1Q8NGG5 319 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 THOC1Q96FV9 657 aaKnown RBP12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 JAKMIP1Q96N16 626 aaKnown RBP12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CXXC1Q9P0U4 656 aaPredicted RBP12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 PUF60Q9UHX1 559 aaKnown RBP12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CTAGE15A4D2H0 777 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 KIF28PB7ZC32 967 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 EFCAB14O75071 495 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 IQCF3P0C7M6 154 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CTAGE8P0CG41 777 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 TGFB3P10600 412 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CPA1P15085 419 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 PBX2P40425 430 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CDR1P51861 262 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 NLRP12P59046 1061 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 NAA25Q14CX7 972 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CTAGE6Q86UF2 777 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 CTAGE4Q8IX94 777 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 PARP9Q8IXQ6 854 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 TAAR1Q96RJ0 339 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 MTA3Q9BTC8 594 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 SLC40A1Q9NP59 571 aa12.53□□□□□ -0.4
TRAF3IP2-208ENST00000392556 GOLGA6CA6NDK9 693 aa12.52□□□□□ -0.4
TRAF3IP2-208ENST00000392556 ZBBXA8MT70 800 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms