RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 GFOD1Q9NXC2 390 aa7.45□□□□□ -1.22
TRAV35-201ENST00000390462 PPARGC1AQ9UBK2 798 aaKnown RBP7.45□□□□□ -1.22
TRAV35-201ENST00000390462 SLC13A4Q9UKG4 626 aa7.45□□□□□ -1.22
TRAV35-201ENST00000390462 SYNDIG1LA6NDD5 238 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 POM121BA6NF01 834 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 A6NLC8 198 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 LINC01387J3KSC0 135 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 FGFR3P22607 806 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 CNTFP26441 200 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 GALNSP34059 522 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 CLNS1AP54105 237 aaKnown RBP7.44□□□□□ -1.22
TRAV35-201ENST00000390462 NAP1L1P55209 391 aaKnown RBP7.44□□□□□ -1.22
TRAV35-201ENST00000390462 POU4F1Q01851 419 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 KCNK18Q7Z418 384 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 SNX32Q86XE0 403 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 CCDC103Q8IW40 242 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 IL22RA1Q8N6P7 574 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 ASB12Q8WXK4 309 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 HVCN1Q96D96 273 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 ZC3H10Q96K80 434 aaKnown RBP7.44□□□□□ -1.22
TRAV35-201ENST00000390462 TRIM47Q96LD4 638 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 BRD9Q9H8M2 597 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 SP110Q9HB58 689 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 RAD18Q9NS91 495 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 PHF24Q9UPV7 400 aa7.44□□□□□ -1.22
TRAV35-201ENST00000390462 TISP43B9A030 160 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 B9A039 149 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 STXBP3O00186 592 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 FSCN2O14926 492 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 TMPRSS2O15393 492 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 TBX18O95935 607 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 ATP1A3P13637 1013 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 TSHRP16473 764 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 XBP1P17861 261 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 XPAP23025 273 aaPredicted RBP7.43□□□□□ -1.22
TRAV35-201ENST00000390462 CD40P25942 277 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 HSPA7P48741 367 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 CEBPAP49715 358 aaPredicted RBP7.43□□□□□ -1.22
TRAV35-201ENST00000390462 SLC16A1P53985 500 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 IRF9Q00978 393 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 GALNT1Q10472 559 aaPredicted RBP7.43□□□□□ -1.22
TRAV35-201ENST00000390462 KCNAB2Q13303 367 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 ZACNQ401N2 412 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 ARMCX6Q7L4S7 300 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 UBE3DQ7Z6J8 389 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 SIRT2Q8IXJ6 389 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 DNAJB8Q8NHS0 232 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 ZNF496Q96IT1 587 aaPredicted RBP7.43□□□□□ -1.22
TRAV35-201ENST00000390462 CDHR1Q96JP9 859 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 FBXL18Q96ME1 805 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 ZMAT2Q96NC0 199 aaKnown RBP7.43□□□□□ -1.22
TRAV35-201ENST00000390462 STK31Q9BXU1 1019 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 C22orf23Q9BZE7 217 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 FOXQ1Q9C009 403 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 PCIF1Q9H4Z3 704 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 CRIM1Q9NZV1 1036 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 PPP1R9AQ9ULJ8 1098 aa7.43□□□□□ -1.22
TRAV35-201ENST00000390462 ABCA10Q8WWZ4 1543 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 LOC100289279A0A1B0GTE1 492 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 C2orf71A6NGG8 1288 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 H0Y8X5 98 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 DDX3XO00571 662 aaKnown RBP eCLIP7.42□□□□□ -1.22
TRAV35-201ENST00000390462 AURKAO14965 403 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 FRS3O43559 492 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 CKMT1AP12532 417 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 RXRBP28702 533 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 UBA7P41226 1012 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 IL12RB1P42701 662 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 ALDH9A1P49189 494 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 CLK1P49759 484 aaKnown RBP7.42□□□□□ -1.22
TRAV35-201ENST00000390462 SLC5A3P53794 718 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 ATXN1P54253 815 aaKnown RBP7.42□□□□□ -1.22
TRAV35-201ENST00000390462 CACNB2Q08289 660 aaPredicted RBP7.42□□□□□ -1.22
TRAV35-201ENST00000390462 SNW1Q13573 536 aaKnown RBP7.42□□□□□ -1.22
TRAV35-201ENST00000390462 PMS2P11Q13670 270 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 MPEG1Q2M385 716 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 TMCO3Q6UWJ1 677 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 HEATR4Q86WZ0 1026 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 LIX1LQ8IVB5 337 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 MSL3Q8N5Y2 521 aaKnown RBP7.42□□□□□ -1.22
TRAV35-201ENST00000390462 ATG16L2Q8NAA4 619 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 RCBTB1Q8NDN9 531 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 KLHDC4Q8TBB5 520 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 RIN2Q8WYP3 895 aaPredicted RBP7.42□□□□□ -1.22
TRAV35-201ENST00000390462 TNFRSF25Q93038 417 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 ATP6V1E2Q96A05 226 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 KLHDC7BQ96G42 594 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 NT5C1BQ96P26 610 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 SORBS1Q9BX66 1292 aaKnown RBP7.42□□□□□ -1.22
TRAV35-201ENST00000390462 ASPNQ9BXN1 380 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 ZCCHC17Q9NP64 241 aaKnown RBP7.42□□□□□ -1.22
TRAV35-201ENST00000390462 IRAK4Q9NWZ3 460 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 STXBP5LQ9Y2K9 1186 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 CEP83Q9Y592 693 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 BACE2Q9Y5Z0 518 aa7.42□□□□□ -1.22
TRAV35-201ENST00000390462 FSD2A1L4K1 749 aa7.41□□□□□ -1.22
TRAV35-201ENST00000390462 ZNF561-AS1K7EIQ3 104 aa7.41□□□□□ -1.22
TRAV35-201ENST00000390462 INMTO95050 263 aa7.41□□□□□ -1.22
TRAV35-201ENST00000390462 PAPLNO95428 1278 aa7.41□□□□□ -1.22
TRAV35-201ENST00000390462 MTHFD2P13995 350 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms