RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 ZNF827Q17R98 1081 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 ZFRQ96KR1 1074 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 POLE3Q9NRF9 147 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 SERPINA10Q9UK55 444 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 PPRC1Q5VV67 1664 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 KLHL2O95198 593 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 ZRANB2O95218 330 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 KRT10P13645 584 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 AASDHQ4L235 1098 aaPredicted RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 E9PMD0 336 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 CHEK2O96017 543 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 YWHAGP61981 247 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 MFN1Q8IWA4 741 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 ATL2Q8NHH9 583 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 DPH5Q9H2P9 285 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 CROCCQ5TZA2 2017 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 GOLGA8IPA6NC78 632 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 IQCA1LA6NCM1 817 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 GPC5P78333 572 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 FAM89AQ96GI7 184 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 TTC1Q99614 292 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 TUBA8Q9NY65 449 aaPredicted RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 SUCLA2Q9P2R7 463 aaPredicted RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 CCPG1Q9ULG6 757 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 ARHGEF9O43307 516 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 HOXB6P17509 224 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 TTKP33981 857 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 STAT2P52630 851 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 AP3M2P53677 418 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 VSNL1P62760 191 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 TFDP2Q14188 446 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 GRAMD1BQ3KR37 738 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 C1orf146Q5VVC0 180 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 TRAPPC11Q7Z392 1133 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 DNAJC17Q9NVM6 304 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 A8MXQ7 604 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 PLCG1P19174 1290 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 TNNI1P19237 187 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 ZAP70P43403 619 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 RIPPLY1Q0D2K3 151 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 SNX1Q13596 522 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 KRT24Q2M2I5 525 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 PAPD7Q5XG87 772 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 FBXO31Q5XUX0 539 aaPredicted RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 ZBTB8OSQ8IWT0 167 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 ZNF473Q8WTR7 871 aaKnown RBP9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 CCDC138Q96M89 665 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 CATSPER2Q96P56 530 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 SNX25Q9H3E2 840 aa9.43□□□□□ -0.9
SHROOM4-202ENST00000376020 TTLL1O95922 423 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 RAB15P59190 212 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 ACCSQ96QU6 501 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 CFAP69A5D8W1 941 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 A6NJR5 290 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 ACTN3Q08043 901 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 HIC1Q14526 733 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 HESX1Q9UBX0 185 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 PNPLA7Q6ZV29 1317 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 COPEO14579 308 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 TNNC2P02585 160 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 SKIV2L2P42285 1042 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 ODR4Q5SWX8 454 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 DNAJC7Q99615 494 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 OVOS2A0A0J9YW53 1432 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 OVOS2Q6IE36 1432 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 CCDC88AQ3V6T2 1871 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 XPOTO43592 962 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 PALMO75781 387 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 NUP107P57740 925 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 CYB5D1Q6P9G0 228 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 PRPF31Q8WWY3 499 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 JADE3Q92613 823 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 CENPTQ96BT3 561 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 FAM20AQ96MK3 541 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 PTPRUQ92729 1446 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 USP31Q70CQ4 1352 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 PDE1CQ14123 709 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 CDHR2Q9BYE9 1310 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 H2AFYO75367 372 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 TAF1BQ53T94 588 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 CROCCP3Q8IVE0 287 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 MAGEA13PA6NCF6 341 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 SRGNP10124 158 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 CDH2P19022 906 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 PPARGP37231 505 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 COPS2P61201 443 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 EP400NLQ6ZTU2 488 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 UNC5CLQ8IV45 518 aa9.42□□□□□ -0.9
SHROOM4-202ENST00000376020 PIK3R2O00459 728 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 LDHAP00338 332 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 IL6STP40189 918 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 LCA5Q86VQ0 697 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 RBM17Q96I25 401 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 SEC16BQ96JE7 1060 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 TEKT3Q9BXF9 490 aa9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 PABPC3Q9H361 631 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-202ENST00000376020 KIAA1024Q9UPX6 916 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms