RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 UPP2O95045 317 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 SNAI1O95863 264 aaPredicted RBP3.98□□□□□ -1.77
CCDC66-202ENST00000341455 CD4P01730 458 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 CCNYL3P0C7X3 344 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 GNA11P29992 359 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 GJA9P57773 515 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 MCCD1P59942 119 aaPredicted RBP3.98□□□□□ -1.77
CCDC66-202ENST00000341455 SSRP1Q08945 709 aaKnown RBP3.98□□□□□ -1.77
CCDC66-202ENST00000341455 HYIQ5T013 277 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 RNF187Q5TA31 235 aaPredicted RBP3.98□□□□□ -1.77
CCDC66-202ENST00000341455 IQSEC1Q6DN90 963 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 SNRNP48Q6IEG0 339 aaKnown RBP3.98□□□□□ -1.77
CCDC66-202ENST00000341455 KCTD1Q719H9 257 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 KRT25Q7Z3Z0 450 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 GIMAP8Q8ND71 665 aaPredicted RBP3.98□□□□□ -1.77
CCDC66-202ENST00000341455 TRIB2Q92519 343 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 CUL5Q93034 780 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 PIGSQ96S52 555 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 MMP19Q99542 508 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 NUP88Q99567 741 aaPredicted RBP3.98□□□□□ -1.77
CCDC66-202ENST00000341455 NUDT12Q9BQG2 462 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 EHMT1Q9H9B1 1298 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 KCNMB3Q9NPA1 279 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 COL20A1Q9P218 1284 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 ADD3Q9UEY8 706 aaKnown RBP3.98□□□□□ -1.77
CCDC66-202ENST00000341455 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.98□□□□□ -1.77
CCDC66-202ENST00000341455 EMSYQ7Z589 1322 aa3.98□□□□□ -1.77
CCDC66-202ENST00000341455 COL1A2P08123 1366 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 FRMPD2Q68DX3 1309 aaPredicted RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 PTPDC1A2A3K4 754 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 HAS3O00219 553 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 MEIS1O00470 390 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 TNPO2O14787 897 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 LYPLA2O95372 231 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 ADORA2AP29274 412 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 ADCY7P51828 1080 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 NEK4P51957 841 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 PSMD2Q13200 908 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 DSC3Q14574 896 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 PGM5Q15124 567 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 CNNM4Q6P4Q7 775 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 CPLX2Q6PUV4 134 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 LYPD8Q6UX82 237 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 SLC30A10Q6XR72 485 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 RASGRP2Q7LDG7 609 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 BRAPQ7Z569 592 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 C4orf32Q8N8J7 132 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 FBXO18Q8NFZ0 1043 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 NPLOC4Q8TAT6 608 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 SLC5A5Q92911 643 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 MPHOSPH6Q99547 160 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 PDCD2LQ9BRP1 358 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 ZKSCAN3Q9BRR0 538 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 SLKQ9H2G2 1235 aaPredicted RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 PCDH12Q9NPG4 1184 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 CCPG1Q9ULG6 757 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 PCDHA6Q9UN73 950 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 NOD1Q9Y239 953 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 KIF3AQ9Y496 699 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 PCDHA8Q9Y5H6 950 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 MTCH2Q9Y6C9 303 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 MCM3APO60318 1980 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 PDCD11Q14690 1871 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 GCOM1H8Y6P7 765 aaPredicted RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 SEPT4O43236 478 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 CAND2O75155 1236 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 ADAMTS4O75173 837 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 EIF3JO75822 258 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 RPLP2P05387 115 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 POLR2MP0CAP2 368 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 KRT76Q01546 638 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 NAA30Q147X3 362 aaPredicted RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 ZNF394Q53GI3 561 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 RRP12Q5JTH9 1297 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 ELOA2Q8IYF1 753 aaPredicted RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 TRIM22Q8IYM9 498 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 RPUSD2Q8IZ73 545 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 ANKRD13CQ8N6S4 541 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 TRPV1Q8NER1 839 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 ETNPPLQ8TBG4 499 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 HELQQ8TDG4 1101 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 NSUN6Q8TEA1 469 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 CDHR1Q96JP9 859 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 AGBL1Q96MI9 1066 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 MTMR9Q96QG7 549 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 RIT2Q99578 217 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 RHOBTB2Q9BYZ6 727 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 ABHD16BQ9H3Z7 469 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 JADE2Q9NQC1 790 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 FLRT1Q9NZU1 646 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 SEC63Q9UGP8 760 aaKnown RBP3.97□□□□□ -1.77
CCDC66-202ENST00000341455 MSRAQ9UJ68 235 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 IGSF9BQ9UPX0 1349 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 NFIBO00712 420 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 CPA1P15085 419 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 NPR3P17342 541 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 PDCP20941 246 aa3.97□□□□□ -1.77
CCDC66-202ENST00000341455 CCND2P30279 289 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms