RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Slc40a1Q9JHI9 570 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Hnrnph2P70333 449 aaKnown RBP10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Zbtb38Q3LR78 1197 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Tdrd7Q8K1H1 1086 aaKnown RBP10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Arfip2Q8K221 341 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Tmem119Q8R138 280 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Tmem192Q9CXT7 266 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Ppp1r3fQ9JIG4 799 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Lrrc6O88978 473 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Vps4bP46467 444 aaKnown RBP10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Tmem132dQ76HP3 1097 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Swi5Q8K3D3 89 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Haus8Q99L00 373 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Rpa3Q9CQ71 121 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Krt34Q9D646 392 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Depdc5P61460 1591 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 CidebO70303 219 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Axin2O88566 840 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Atp6v1e1P50518 226 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 LbrQ3U9G9 626 aaKnown RBP10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 LrmpQ60664 539 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Zbtb40Q6PCS8 1258 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Mrps26Q80ZS3 200 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 StrbpQ91WM1 672 aaKnown RBP10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 CltcQ68FD5 1675 aaKnown RBP10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Map3k15A2AQW0 1331 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Osbpl9A2A8Z1 736 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Ano3A2AHL1 981 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Lrrc32G3XA59 663 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Pja1O55176 578 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Dnajc6Q80TZ3 938 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 PdhbQ9D051 359 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Magi3Q9EQJ9 1476 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Itpripl1A2ASA8 547 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Supt3B0QZW4 406 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 XpcP51612 930 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 PtgdrP70263 357 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Afap1l1Q8BZI0 768 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Slc5a4bQ91ZP4 660 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Mrpl46Q9EQI8 283 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 GgcxQ9QYC7 757 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Stmn3O70166 180 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Nek1P51954 1203 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Eif4a1P60843 406 aaKnown RBP10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Hipk4Q3V016 616 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 WaplQ65Z40 1200 aaKnown RBP10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Ddx19bQ8BZY3 494 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Homer3Q99JP6 356 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Col1a2Q01149 1372 aa10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 VirmaA2AIV2 1811 aaKnown RBP10.72□□□□□ -0.69
Col6a5-203ENSMUST00000190193 FscbA1EGX6 1074 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Ap1g2O88512 791 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Jdp2P97875 163 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Edem3Q2HXL6 931 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Frmd8Q3UFK8 466 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 MyripQ8K3I4 856 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Ttc30a1Q99J38 664 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 FliiQ9JJ28 1271 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Eno3P21550 434 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Pcif1P59114 706 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Kcnf1Q7TSH7 493 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Nxf7Q80SZ6 620 aaKnown RBP10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Rfx6Q8C7R7 927 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Rpn1Q91YQ5 608 aaKnown RBP10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Timm50Q9D880 353 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Copg1Q9QZE5 874 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Hspa2P17156 633 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Tmod1P49813 359 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Tfdp1Q08639 410 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Sult1d1Q3UZZ6 295 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Tpp2Q64514 1262 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Gpr139Q80UC8 345 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Dis3l2Q8CI75 870 aaKnown RBP10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 LzicQ8K3C3 190 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 4921524L21RikQ9D5T2 438 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 CflarO35732 481 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Erp29P57759 262 aaKnown RBP10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Pacsin1Q61644 441 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Gimap5Q8BWF2 308 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Cib4Q9D9N5 185 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Scyl3Q9DBQ7 735 aa10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 Top3bQ9Z321 862 aaKnown RBP10.71□□□□□ -0.69
Col6a5-203ENSMUST00000190193 LtkP08923 888 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 PorP37040 678 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Xlr3aQ60595 226 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Asap2Q7SIG6 958 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Ccdc130Q9D516 385 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Setbp1Q9Z180 1582 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Ctnnal1O88327 731 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Mup5P11591 180 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Afap1l2Q5DTU0 825 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Cyp7b1Q60991 507 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 AdalQ80SY6 360 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Arid5bQ8BM75 1188 aaKnown RBP10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 LRWD1Q8BUI3 648 aaKnown RBP10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 CnstQ8CBC4 711 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Pdxdc1Q99K01 787 aaKnown RBP10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Ska2Q9CR46 120 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 Thap2Q9D305 217 aa10.71□□□□□ -0.7
Col6a5-203ENSMUST00000190193 CroccQ8CJ40 2009 aa10.71□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms