RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Ext2P70428 718 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ulk3Q3U3Q1 472 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Hsph1Q61699 858 aaKnown RBP10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 FtoQ8BGW1 502 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Srp68Q8BMA6 625 aaKnown RBP10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Mbd5B1AYB6 1498 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Lrrc6O88978 473 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 CpQ61147 1061 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Palm2Q8BR92 376 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cyp2d12Q8BVD2 504 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 SmtnQ921U8 923 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tmem47Q9JJG6 181 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Morf4l2Q9R0Q4 288 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cep170Q6A065 1588 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Prss51A0A286YDY8 319 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pdzd8B9EJ80 1147 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Mgat1P27808 447 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 AlcamQ61490 583 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Znf507Q6ZPY5 941 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 LnpkQ7TQ95 425 aa10.01□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gm7356A0A087WSA6 508 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gtpbp6Q3U6U5 514 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 SybuQ8BHS8 665 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cog4Q8R1U1 785 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ces1dQ8VCT4 565 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 NelfcdQ922L6 591 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Dach2Q925Q8 634 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Serpinb3bQ9D1Q5 387 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Rabgef1Q9JM13 491 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Setd1aE9PYH6 1716 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Exoc4O35382 975 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ubxn10Q8BG34 277 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Fkbp6Q91XW8 327 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Snf8Q9CZ28 258 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tex9Q9D845 387 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ccdc97Q9DBT3 340 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Adam22Q9R1V6 904 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Abca16E9PWJ7 1678 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Drp2Q05AA6 957 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tatdn3Q3U1C6 294 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Adcy2Q80TL1 1090 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ephb1Q8CBF3 984 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Prpf31Q8CCF0 499 aaKnown RBP10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Trim59Q922Y2 403 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Prdm2A2A7B5 1709 aaKnown RBP10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Eddm13E9Q7F5 164 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Cdk4P30285 303 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gm3414Q3TNU4 584 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Baiap3Q80TT2 1134 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Fthl17aQ9DAX0 182 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ap2b1Q9DBG3 937 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 IydQ9DCX8 285 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 EgfrQ01279 1210 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Rpf1Q7TND5 349 aaKnown RBP10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Sh3tc2Q80VA5 1289 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 AbraQ8BUZ1 375 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Stag2O35638 1231 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Crnkl1P63154 690 aaKnown RBP10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Dpf2Q61103 391 aaKnown RBP10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ccdc154Q6RUT8 657 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 HnmtQ91VF2 295 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Rhobtb1Q9DAK3 695 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ubxn8Q9QZ49 277 aa10□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Akap17bA2A3V1 959 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Serpinb3cA2RSF9 386 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 SelenovD3YXG1 328 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Stat3P42227 770 aaKnown RBP9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tmtc1Q3UV71 942 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Foxn3Q499D0 457 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tmem232Q5K6N0 675 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Fam196bQ6GQV1 535 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Hdac10Q6P3E7 666 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Dync1li2Q6PDL0 492 aaKnown RBP9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gramd1bQ80TI0 738 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ccdc40Q8BI79 1192 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ulbp1Q8HWA3 334 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 CalcbQ99MP3 130 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Tnfrsf10bQ9QZM4 381 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Kiaa1551Q5DTW7 1521 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Gm1604bQ3TRG0 118 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Serpinb6dQ3UWK8 375 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 E2f8Q58FA4 860 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Skida1Q80YR3 822 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Fsd1lQ8BYN5 507 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Raph1F2Z3U3 1266 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Pth1rP41593 591 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 GmncQ3URY2 333 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Sept10Q8C650 452 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Arfip2Q8K221 341 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Kcnq3Q8K3F6 873 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 McamQ8R2Y2 648 aaKnown RBP9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Sucla2Q9Z2I9 463 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 TnrQ8BYI9 1358 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Upf3bQ3ULL6 472 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ppp1r13lQ5I1X5 824 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 TarsQ9D0R2 722 aaKnown RBP9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Capn9Q9D805 690 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Sertad1Q9JL10 236 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Slc35g2D3YVE8 412 aa9.99□□□□□ -0.81
Prpf40a-201ENSMUST00000076313 Ccng2O08918 344 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms