RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 MsraQ9D6Y7 233 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Ppp1r12aQ9DBR7 1029 aaKnown RBP8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 PbsnO08976 174 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 PtprcP06800 1291 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Dynlt1P51807 113 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Kcnk9Q3LS21 402 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Prmt9Q3U3W5 846 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Sh2d4aQ9D7V1 421 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Zc3h13E9Q784 1729 aaKnown RBP8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Abca8aQ8K442 1620 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Crb1Q8VHS2 1405 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Pou5f1P20263 352 aaKnown RBP8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Cacnb3P54285 484 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Tigd5Q499M4 642 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Cog5Q8C0L8 829 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Trappc12Q8K2L8 797 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Upb1Q8VC97 393 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 LrgukQ9D5S7 820 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Serpina9Q9D7D2 418 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Syngap1F6SEU4 1340 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Rfx8D3YU81 596 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Cyp3a57D3YYZ0 503 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Thumpd3P97770 505 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Tbc1d30Q69ZT9 766 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Acap3Q6NXL5 833 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Wdr3Q8BHB4 942 aaKnown RBP8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Col23a1Q8K4G2 532 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Map3k15A2AQW0 1331 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Kif1aP33173 1695 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Gm5483B2RV77 97 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Krt4P07744 525 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Cap1P40124 474 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 RnaselQ05921 735 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Myo1dQ5SYD0 1006 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 KhnynQ80U38 671 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Rd3Q8BRE0 195 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Pomgnt2Q8BW41 605 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Ddx18Q8K363 660 aaKnown RBP8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Cul1Q9WTX6 776 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Flt4P35917 1363 aa8.83□□□□□ -1
Ssr1-201ENSMUST00000021864 Ttc13A0A1L1SSC7 844 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 PRAG1Q571I4 1179 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Atp1a3Q6PIC6 1013 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Castor1Q9CWQ8 331 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Desi2Q9D291 194 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Ppp1r3fQ9JIG4 799 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Tmem131lQ3U3D7 1597 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Chrna5Q2MKA5 467 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Unc5clQ6R653 518 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Dhx58Q99J87 678 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Cox16Q9CR63 106 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Nde1Q9CZA6 344 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 C3P01027 1663 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 PplQ9R269 1755 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Gm9774A0A0A6YVU8 407 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 A0A286YCQ6 122 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Gm8879F6R3J9 157 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 D1Pas1P16381 660 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Lig1P37913 916 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Xxylt1Q3U4G3 392 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Ston1Q8CDJ8 730 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 PlvapQ91VC4 438 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Q9D1F3 157 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Rhobtb1Q9DAK3 695 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 RabggtaQ9JHK4 567 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Kat6bQ8BRB7 1872 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Scnn1aQ61180 699 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Krt39Q6IFX4 482 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Gpsm2Q8VDU0 679 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Tex12Q9CR81 123 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Wars2Q9CYK1 360 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Aldh18a1Q9Z110 795 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Snap47Q8R570 413 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Pls3Q99K51 630 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Rabgef1Q9JM13 491 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Gm28961A0A087WPA5 222 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Gm21858A0A087WQ24 222 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Gbp4A4UUI3 631 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Mmrn1B2RPV6 1210 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Gm8922F6XVS9 199 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Enc1O35709 589 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Serpina3kP07759 418 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Meis1Q60954 390 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Vav2Q60992 868 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Scaf8Q6DID3 1268 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Slc9c1Q6UJY2 1175 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Pcdhb11Q91UZ8 797 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Fam217aQ9D9W6 419 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Tlr2Q9QUN7 784 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 CoblQ5NBX1 1337 aaKnown RBP8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Tmem132bF7BAB2 1078 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Ect2Q07139 913 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Hdac4Q6NZM9 1076 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Phf20Q8BLG0 1010 aaKnown RBP8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Slc26a6Q8CIW6 758 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Appl1Q8K3H0 707 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Chordc1Q9D1P4 331 aaKnown RBP8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 NfkbizQ9EST8 728 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Nr1h3Q9Z0Y9 445 aa8.82□□□□□ -1
Ssr1-201ENSMUST00000021864 Slit1Q80TR4 1531 aa8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms