RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W GRC3Q07845 632 aa3.8□□□□□ -1.8
SRO7YPR032W YOR059CQ08448 450 aaKnown RBP3.8□□□□□ -1.8
SRO7YPR032W SCP1Q08873 200 aa3.8□□□□□ -1.8
SRO7YPR032W YDL199CQ12407 687 aa3.8□□□□□ -1.8
SRO7YPR032W MET2P08465 486 aa3.79□□□□□ -1.8
SRO7YPR032W TFS1P14306 219 aa3.79□□□□□ -1.8
SRO7YPR032W SDH2P21801 266 aa3.79□□□□□ -1.8
SRO7YPR032W ESS1P22696 170 aa3.79□□□□□ -1.8
SRO7YPR032W CYS3P31373 394 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W UTR2P32623 467 aa3.79□□□□□ -1.8
SRO7YPR032W IRS4P36115 615 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W SOL2P37262 315 aa3.79□□□□□ -1.8
SRO7YPR032W MUP3P38734 546 aa3.79□□□□□ -1.8
SRO7YPR032W NOP16P40007 231 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W YER010CP40011 234 aa3.79□□□□□ -1.8
SRO7YPR032W YIL055CP40523 627 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W PRM2P40534 656 aa3.79□□□□□ -1.8
SRO7YPR032W SNM1P40993 198 aa3.79□□□□□ -1.8
SRO7YPR032W PFA3P42836 336 aa3.79□□□□□ -1.8
SRO7YPR032W ATG18P43601 500 aa3.79□□□□□ -1.8
SRO7YPR032W CCC1P47818 322 aa3.79□□□□□ -1.8
SRO7YPR032W COS10P52924 374 aa3.79□□□□□ -1.8
SRO7YPR032W IDP3P53982 420 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W HOF1Q05080 669 aa3.79□□□□□ -1.8
SRO7YPR032W RBS1Q05672 457 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W YHC1Q05900 231 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W RIF2Q06208 395 aa3.79□□□□□ -1.8
SRO7YPR032W ANT1Q06497 328 aa3.79□□□□□ -1.8
SRO7YPR032W PIB1Q06651 286 aa3.79□□□□□ -1.8
SRO7YPR032W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SRO7YPR032W HOS1Q12214 470 aa3.79□□□□□ -1.8
SRO7YPR032W RKM5Q12367 367 aa3.79□□□□□ -1.8
SRO7YPR032W CTF3Q12748 733 aa3.79□□□□□ -1.8
SRO7YPR032W YCK2P23292 546 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W RNA15P25299 296 aaPredicted RBP3.79□□□□□ -1.8
SRO7YPR032W PIN4P34217 668 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SRO7YPR032W DOA1P36037 715 aa3.79□□□□□ -1.8
SRO7YPR032W FLR1P38124 548 aa3.79□□□□□ -1.8
SRO7YPR032W TSL1P38427 1098 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W NDT80P38830 627 aa3.79□□□□□ -1.8
SRO7YPR032W AYR1P40471 297 aa3.79□□□□□ -1.8
SRO7YPR032W PKP1P40530 394 aa3.79□□□□□ -1.8
SRO7YPR032W CHA4P43634 648 aa3.79□□□□□ -1.8
SRO7YPR032W HMS2P47175 358 aa3.79□□□□□ -1.8
SRO7YPR032W DAN1P47178 298 aa3.79□□□□□ -1.8
SRO7YPR032W RRN9P53437 365 aa3.79□□□□□ -1.8
SRO7YPR032W HCH1P53834 153 aa3.79□□□□□ -1.8
SRO7YPR032W SNO1Q03144 224 aa3.79□□□□□ -1.8
SRO7YPR032W NHX1Q04121 633 aa3.79□□□□□ -1.8
SRO7YPR032W EMI1Q04406 187 aa3.79□□□□□ -1.8
SRO7YPR032W GPB1Q08886 897 aa3.79□□□□□ -1.8
SRO7YPR032W AGC1Q12482 902 aa3.79□□□□□ -1.8
SRO7YPR032W SPS4P09937 338 aa3.79□□□□□ -1.8
SRO7YPR032W AAT2P23542 418 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W PRE8P23639 250 aa3.79□□□□□ -1.8
SRO7YPR032W GUT1P32190 709 aa3.79□□□□□ -1.8
SRO7YPR032W SSS1P35179 80 aa3.79□□□□□ -1.8
SRO7YPR032W YKL151CP36059 337 aa3.79□□□□□ -1.8
SRO7YPR032W ALY1P36117 915 aa3.79□□□□□ -1.8
SRO7YPR032W SDH4P37298 181 aa3.79□□□□□ -1.8
SRO7YPR032W YEL025CP39991 1188 aa3.79□□□□□ -1.8
SRO7YPR032W YJR149WP47177 404 aa3.79□□□□□ -1.8
SRO7YPR032W GTO1P48239 356 aa3.79□□□□□ -1.8
SRO7YPR032W YGL117WP53133 265 aa3.79□□□□□ -1.8
SRO7YPR032W PRM1P53835 661 aa3.79□□□□□ -1.8
SRO7YPR032W ATC1Q04005 294 aa3.79□□□□□ -1.8
SRO7YPR032W YDR124WQ04608 324 aa3.79□□□□□ -1.8
SRO7YPR032W AIM39Q08223 395 aa3.79□□□□□ -1.8
SRO7YPR032W NRT1Q08485 598 aa3.79□□□□□ -1.8
SRO7YPR032W RTK1Q12100 620 aaPredicted RBP3.79□□□□□ -1.8
SRO7YPR032W HRP1Q99383 534 aaKnown RBP3.79□□□□□ -1.8
SRO7YPR032W STT4P37297 1900 aa3.79□□□□□ -1.8
SRO7YPR032W CBP1P07252 654 aa3.78□□□□□ -1.8
SRO7YPR032W REV1P12689 985 aa3.78□□□□□ -1.8
SRO7YPR032W PET9P18239 318 aaKnown RBP3.78□□□□□ -1.8
SRO7YPR032W ASK1P35734 292 aa3.78□□□□□ -1.8
SRO7YPR032W ATG8P38182 117 aaRIP-Chip data3.78□□□□□ -1.8not detected
SRO7YPR032W POP8P38208 133 aa3.78□□□□□ -1.8
SRO7YPR032W SFB3P38810 929 aa3.78□□□□□ -1.8
SRO7YPR032W HPA3P39979 161 aa3.78□□□□□ -1.8
SRO7YPR032W TAD2P47058 250 aa3.78□□□□□ -1.8
SRO7YPR032W PHO23P50947 330 aa3.78□□□□□ -1.8
SRO7YPR032W KTR6P54070 446 aa3.78□□□□□ -1.8
SRO7YPR032W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
SRO7YPR032W NUP100Q02629 959 aa3.78□□□□□ -1.8
SRO7YPR032W RLI1Q03195 608 aaKnown RBP3.78□□□□□ -1.8
SRO7YPR032W SPR28Q04921 423 aa3.78□□□□□ -1.8
SRO7YPR032W YPR127WQ06494 345 aa3.78□□□□□ -1.8
SRO7YPR032W SNA4Q07549 140 aa3.78□□□□□ -1.8
SRO7YPR032W NMD4Q12129 218 aa3.78□□□□□ -1.8
SRO7YPR032W COX6P00427 148 aa3.78□□□□□ -1.8
SRO7YPR032W HTB1P02293 131 aaKnown RBP3.78□□□□□ -1.8
SRO7YPR032W HTB2P02294 131 aa3.78□□□□□ -1.8
SRO7YPR032W ATP4P05626 244 aa3.78□□□□□ -1.8
SRO7YPR032W CDC7P06243 507 aa3.78□□□□□ -1.8
SRO7YPR032W SAM35P14693 329 aa3.78□□□□□ -1.8
SRO7YPR032W DCC1P25559 380 aa3.78□□□□□ -1.8
SRO7YPR032W YCL068CP25593 260 aa3.78□□□□□ -1.8
SRO7YPR032W PWP2P25635 923 aaKnown RBP3.78□□□□□ -1.8
SRO7YPR032W DEG1P31115 442 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms