RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C HDA2Q06629 674 aa9.08□□□□□ -0.96
SSN3YPL042C YPR202WQ08993 238 aa9.08□□□□□ -0.96
SSN3YPL042C ISN1Q99312 450 aa9.08□□□□□ -0.96
SSN3YPL042C LEU4P06208 619 aaKnown RBP9.07□□□□□ -0.96
SSN3YPL042C CPA1P07258 411 aaKnown RBP9.07□□□□□ -0.96
SSN3YPL042C CPR2P23285 205 aa9.07□□□□□ -0.96
SSN3YPL042C CPR4P25334 318 aa9.07□□□□□ -0.96
SSN3YPL042C BUB2P26448 306 aaPredicted RBP9.07□□□□□ -0.96
SSN3YPL042C SBA1P28707 216 aaKnown RBP9.07□□□□□ -0.96
SSN3YPL042C CAM1P29547 415 aaKnown RBP9.07□□□□□ -0.96
SSN3YPL042C DGR2P32330 852 aa9.07□□□□□ -0.96
SSN3YPL042C SSN3P39073 555 aa9.07□□□□□ -0.96
SSN3YPL042C FMC1P40491 155 aa9.07□□□□□ -0.96
SSN3YPL042C TDA7P53882 636 aaPredicted RBP9.07□□□□□ -0.96
SSN3YPL042C GPB1Q08886 897 aa9.07□□□□□ -0.96
SSN3YPL042C RPP2AP05319 106 aaKnown RBP9.07□□□□□ -0.96
SSN3YPL042C MATALPHA1P0CY06 175 aa9.07□□□□□ -0.96
SSN3YPL042C HMLALPHA1P0CY07 175 aa9.07□□□□□ -0.96
SSN3YPL042C FRS1P15624 595 aaKnown RBP9.07□□□□□ -0.96
SSN3YPL042C ERG6P25087 383 aaKnown RBP9.07□□□□□ -0.96
SSN3YPL042C ELF1P36053 145 aa9.07□□□□□ -0.96
SSN3YPL042C IML3P38265 245 aa9.07□□□□□ -0.96
SSN3YPL042C SEH1P53011 349 aaKnown RBP9.07□□□□□ -0.96
SSN3YPL042C CCE1Q03702 353 aa9.07□□□□□ -0.96
SSN3YPL042C SWF1Q04629 336 aa9.07□□□□□ -0.96
SSN3YPL042C YPQ2Q06328 317 aa9.07□□□□□ -0.96
SSN3YPL042C SNX3Q08826 162 aaKnown RBP9.07□□□□□ -0.96
SSN3YPL042C YLR049CQ12110 428 aa9.07□□□□□ -0.96
SSN3YPL042C SPT3P06844 337 aa9.06□□□□□ -0.96
SSN3YPL042C YAR066WP0CX18 203 aa9.06□□□□□ -0.96
SSN3YPL042C YHR214WP0CX19 203 aa9.06□□□□□ -0.96
SSN3YPL042C RPL1AP0CX43 217 aaKnown RBP9.06□□□□□ -0.96
SSN3YPL042C RPL1BP0CX44 217 aaKnown RBP9.06□□□□□ -0.96
SSN3YPL042C RFA2P26754 273 aaKnown RBP9.06□□□□□ -0.96
SSN3YPL042C SUI1P32911 108 aaKnown RBP9.06□□□□□ -0.96
SSN3YPL042C RPS1AP33442 255 aaKnown RBP9.06□□□□□ -0.96
SSN3YPL042C PTC1P35182 281 aa9.06□□□□□ -0.96
SSN3YPL042C SPT10P35208 640 aa9.06□□□□□ -0.96
SSN3YPL042C TRM5P38793 499 aa9.06□□□□□ -0.96
SSN3YPL042C CYC2P38909 366 aa9.06□□□□□ -0.96
SSN3YPL042C MCH5Q08777 521 aa9.06□□□□□ -0.96
SSN3YPL042C HBN1Q96VH4 193 aa9.06□□□□□ -0.96
SSN3YPL042C ARD1P07347 238 aaPredicted RBP9.05□□□□□ -0.96
SSN3YPL042C PEX3P28795 441 aa9.05□□□□□ -0.96
SSN3YPL042C FUN26P31381 517 aa9.05□□□□□ -0.96
SSN3YPL042C AST1P35183 429 aa9.05□□□□□ -0.96
SSN3YPL042C FAT1P38225 669 aa9.05□□□□□ -0.96
SSN3YPL042C NPT1P39683 429 aaKnown RBP9.05□□□□□ -0.96
SSN3YPL042C HXT14P42833 540 aa9.05□□□□□ -0.96
SSN3YPL042C LSB3P43603 459 aaKnown RBP9.05□□□□□ -0.96
SSN3YPL042C AIM24P47127 394 aa9.05□□□□□ -0.96
SSN3YPL042C PUS4P48567 403 aaKnown RBP9.05□□□□□ -0.96
SSN3YPL042C YGR126WP53274 230 aa9.05□□□□□ -0.96
SSN3YPL042C ACS1Q01574 713 aa9.05□□□□□ -0.96
SSN3YPL042C YDR239CQ03780 787 aa9.05□□□□□ -0.96
SSN3YPL042C RUB1Q03919 77 aa9.05□□□□□ -0.96
SSN3YPL042C HED1Q03937 162 aa9.05□□□□□ -0.96
SSN3YPL042C RSM24Q03976 319 aa9.05□□□□□ -0.96
SSN3YPL042C YLR040CQ07988 224 aa9.05□□□□□ -0.96
SSN3YPL042C MED2Q12124 431 aa9.05□□□□□ -0.96
SSN3YPL042C BBP1Q12365 385 aa9.05□□□□□ -0.96
SSN3YPL042C SUC2P00724 532 aa9.04□□□□□ -0.96
SSN3YPL042C COS2P0CX12 379 aa9.04□□□□□ -0.96
SSN3YPL042C COS3P0CX13 379 aa9.04□□□□□ -0.96
SSN3YPL042C CCR4P31384 837 aaKnown RBP9.04□□□□□ -0.96
SSN3YPL042C COX13P32799 129 aa9.04□□□□□ -0.96
SSN3YPL042C GMH1P36125 273 aa9.04□□□□□ -0.96
SSN3YPL042C YER121WP40076 114 aa9.04□□□□□ -0.96
SSN3YPL042C FKH2P41813 862 aa9.04□□□□□ -0.96
SSN3YPL042C COS4P43542 379 aa9.04□□□□□ -0.96
SSN3YPL042C NBP35P52920 328 aa9.04□□□□□ -0.96
SSN3YPL042C YGL185CP53100 379 aa9.04□□□□□ -0.96
SSN3YPL042C YGL108CP53139 140 aa9.04□□□□□ -0.96
SSN3YPL042C VOA1P53262 265 aa9.04□□□□□ -0.96
SSN3YPL042C YDR476CQ03362 224 aa9.04□□□□□ -0.96
SSN3YPL042C CDA1Q06702 301 aa9.04□□□□□ -0.96
SSN3YPL042C TSC13Q99190 310 aa9.04□□□□□ -0.96
SSN3YPL042C CDC21P06785 304 aa9.04□□□□□ -0.96
SSN3YPL042C CDC23P16522 626 aa9.04□□□□□ -0.96
SSN3YPL042C YBL029WP38201 376 aa9.04□□□□□ -0.96
SSN3YPL042C RRP3P38712 501 aaKnown RBP9.04□□□□□ -0.96
SSN3YPL042C YHR078WP38799 552 aa9.04□□□□□ -0.96
SSN3YPL042C UBA4P38820 440 aa9.04□□□□□ -0.96
SSN3YPL042C PRP38Q00723 242 aaPredicted RBP9.04□□□□□ -0.96
SSN3YPL042C MAP1Q01662 387 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
SSN3YPL042C ARX1Q03862 593 aaKnown RBP9.04□□□□□ -0.96
SSN3YPL042C SAS5Q99314 248 aa9.04□□□□□ -0.96
SSN3YPL042C Q0144Q9ZZW2 109 aa9.04□□□□□ -0.96
SSN3YPL042C RPL25P04456 142 aaKnown RBP9.03□□□□□ -0.96
SSN3YPL042C QCR2P07257 368 aa9.03□□□□□ -0.96
SSN3YPL042C SWI5P08153 709 aa9.03□□□□□ -0.96
SSN3YPL042C RPL27AP0C2H6 136 aaKnown RBP9.03□□□□□ -0.96
SSN3YPL042C RPL27BP0C2H7 136 aaKnown RBP9.03□□□□□ -0.96
SSN3YPL042C YCP4P25349 247 aaKnown RBP9.03□□□□□ -0.96
SSN3YPL042C PRE4P30657 266 aa9.03□□□□□ -0.96
SSN3YPL042C GSP1P32835 219 aaKnown RBP9.03□□□□□ -0.96
SSN3YPL042C GSP2P32836 220 aaKnown RBP9.03□□□□□ -0.96
SSN3YPL042C ATO2P32907 282 aa9.03□□□□□ -0.96
SSN3YPL042C RPF2P36160 344 aaKnown RBP9.03□□□□□ -0.96
SSN3YPL042C PUG1P40100 303 aa9.03□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms