RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W SEC27P41811 889 aaKnown RBP2.86□□□□□ -1.95
SRL1YOR247W TOS2P50078 622 aa2.86□□□□□ -1.95
SRL1YOR247W MRM2P53123 320 aa2.86□□□□□ -1.95
SRL1YOR247W MTQ1P53944 314 aa2.86□□□□□ -1.95
SRL1YOR247W YMR102CQ03177 834 aa2.86□□□□□ -1.95
SRL1YOR247W YMR010WQ03687 405 aa2.86□□□□□ -1.95
SRL1YOR247W SMP3Q04174 516 aa2.86□□□□□ -1.95
SRL1YOR247W YMR111CQ04461 462 aaPredicted RBP2.86□□□□□ -1.95
SRL1YOR247W YMR317WQ04893 1140 aa2.86□□□□□ -1.95
SRL1YOR247W MRPL35Q06678 367 aa2.86□□□□□ -1.95
SRL1YOR247W SMC5Q08204 1093 aa2.86□□□□□ -1.95
SRL1YOR247W APC5Q08683 685 aa2.86□□□□□ -1.95
SRL1YOR247W YRM1Q12340 786 aa2.86□□□□□ -1.95
SRL1YOR247W EAF3Q12432 401 aa2.86□□□□□ -1.95
SRL1YOR247W PUT4P15380 627 aa2.85□□□□□ -1.95
SRL1YOR247W OM45P16547 393 aa2.85□□□□□ -1.95
SRL1YOR247W DBP3P20447 523 aaKnown RBP2.85□□□□□ -1.95
SRL1YOR247W VMA5P31412 392 aaKnown RBP2.85□□□□□ -1.95
SRL1YOR247W AGA1P32323 725 aa2.85□□□□□ -1.95
SRL1YOR247W YBR139WP38109 508 aa2.85□□□□□ -1.95
SRL1YOR247W SWC5P38326 303 aa2.85□□□□□ -1.95
SRL1YOR247W PRM5P40476 318 aa2.85□□□□□ -1.95
SRL1YOR247W HAC1P41546 238 aa2.85□□□□□ -1.95
SRL1YOR247W AIM24P47127 394 aa2.85□□□□□ -1.95
SRL1YOR247W VOA1P53262 265 aa2.85□□□□□ -1.95
SRL1YOR247W NUP116Q02630 1113 aa2.85□□□□□ -1.95
SRL1YOR247W CAB5Q03941 241 aa2.85□□□□□ -1.95
SRL1YOR247W NAT4Q04751 285 aa2.85□□□□□ -1.95
SRL1YOR247W CUR1Q06469 252 aa2.85□□□□□ -1.95
SRL1YOR247W YLR413WQ06689 675 aa2.85□□□□□ -1.95
SRL1YOR247W SPO24Q3E752 67 aa2.85□□□□□ -1.95
SRL1YOR247W HHF1P02309 103 aaKnown RBP2.84□□□□□ -1.95
SRL1YOR247W MXR2P25566 168 aa2.84□□□□□ -1.95
SRL1YOR247W SBE22P38814 852 aa2.84□□□□□ -1.95
SRL1YOR247W VPS45P38932 577 aa2.84□□□□□ -1.95
SRL1YOR247W BTT1P40314 149 aaPredicted RBP2.84□□□□□ -1.95
SRL1YOR247W AIP1P46680 615 aaKnown RBP2.84□□□□□ -1.95
SRL1YOR247W YGL260WP53056 76 aa2.84□□□□□ -1.95
SRL1YOR247W LST7P53237 242 aa2.84□□□□□ -1.95
SRL1YOR247W CWC25P53854 179 aaKnown RBP2.84□□□□□ -1.95
SRL1YOR247W BUR2Q05949 395 aa2.84□□□□□ -1.95
SRL1YOR247W STE23Q06010 1027 aa2.84□□□□□ -1.95
SRL1YOR247W PCL9Q12477 304 aa2.84□□□□□ -1.95
SRL1YOR247W YBR298C-AQ8TGK4 73 aa2.84□□□□□ -1.95
SRL1YOR247W YCL021W-AQ96VH3 125 aa2.84□□□□□ -1.95
SRL1YOR247W TRP1P00912 224 aa2.83□□□□□ -1.96
SRL1YOR247W RPL18AP0CX49 186 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W RPL18BP0CX50 186 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W RPS16AP0CX51 143 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W RPS16BP0CX52 143 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W NAM2P11325 894 aa2.83□□□□□ -1.96
SRL1YOR247W CIN8P27895 1000 aa2.83□□□□□ -1.96
SRL1YOR247W YPS1P32329 569 aa2.83□□□□□ -1.96
SRL1YOR247W PAD1P33751 242 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
SRL1YOR247W MRPS5P33759 307 aa2.83□□□□□ -1.96
SRL1YOR247W YBL059WP34224 193 aa2.83□□□□□ -1.96
SRL1YOR247W FMP46P36141 133 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W ECM8P38246 354 aa2.83□□□□□ -1.96
SRL1YOR247W CCT4P39078 528 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W UTP25P40498 721 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W YIL067CP40514 678 aa2.83□□□□□ -1.96
SRL1YOR247W LOC1P43586 204 aaPredicted RBP2.83□□□□□ -1.96
SRL1YOR247W KEG1P43614 200 aa2.83□□□□□ -1.96
SRL1YOR247W LCB3P47013 409 aa2.83□□□□□ -1.96
SRL1YOR247W LOH1P47055 219 aa2.83□□□□□ -1.96
SRL1YOR247W TRF5P48561 642 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W SCS3P53012 380 aa2.83□□□□□ -1.96
SRL1YOR247W MTM1P53320 366 aa2.83□□□□□ -1.96
SRL1YOR247W CWC22P53333 577 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W RVB1Q03940 463 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W PBA1Q05778 276 aa2.83□□□□□ -1.96
SRL1YOR247W TSR1Q07381 788 aaKnown RBP2.83□□□□□ -1.96
SRL1YOR247W NDD1Q08887 554 aa2.83□□□□□ -1.96
SRL1YOR247W YOR387CQ08910 206 aa2.83□□□□□ -1.96
SRL1YOR247W YGK3Q12222 375 aaPredicted RBP2.83□□□□□ -1.96
SRL1YOR247W DCP1Q12517 231 aaPredicted RBP2.83□□□□□ -1.96
SRL1YOR247W YCR024C-BQ3E7Z8 88 aa2.83□□□□□ -1.96
SRL1YOR247W SPT15P13393 240 aaKnown RBP2.82□□□□□ -1.96
SRL1YOR247W POP5P28005 173 aa2.82□□□□□ -1.96
SRL1YOR247W DPH5P32469 300 aaPredicted RBP2.82□□□□□ -1.96
SRL1YOR247W PPQ1P32945 549 aa2.82□□□□□ -1.96
SRL1YOR247W RIB7P33312 244 aa2.82□□□□□ -1.96
SRL1YOR247W MYO3P36006 1272 aa2.82□□□□□ -1.96
SRL1YOR247W PEX32P38292 413 aa2.82□□□□□ -1.96
SRL1YOR247W NDT80P38830 627 aa2.82□□□□□ -1.96
SRL1YOR247W PTH1P38876 190 aaKnown RBP2.82□□□□□ -1.96
SRL1YOR247W COS1P53822 381 aa2.82□□□□□ -1.96
SRL1YOR247W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SRL1YOR247W APC4Q04601 652 aa2.82□□□□□ -1.96
SRL1YOR247W RTN1Q04947 295 aaKnown RBP2.82□□□□□ -1.96
SRL1YOR247W RRG8Q06109 277 aa2.82□□□□□ -1.96
SRL1YOR247W YDL114WQ07530 308 aa2.82□□□□□ -1.96
SRL1YOR247W SLF1Q12034 447 aaKnown RBP2.82□□□□□ -1.96
SRL1YOR247W STE2D6VTK4 431 aa2.81□□□□□ -1.96
SRL1YOR247W SUP35P05453 685 aaKnown RBP2.81□□□□□ -1.96
SRL1YOR247W CYC3P06182 269 aa2.81□□□□□ -1.96
SRL1YOR247W MSS116P15424 664 aaKnown RBP2.81□□□□□ -1.96
SRL1YOR247W UGA1P17649 471 aa2.81□□□□□ -1.96
SRL1YOR247W RPB5P20434 215 aa2.81□□□□□ -1.96
SRL1YOR247W FAR1P21268 830 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms