RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFI1	YOR156C	CLN3	P13365	580 aa		4.27	□□□□□ -1.73
NFI1	YOR156C	MSI1	P13712	422 aa		4.27	□□□□□ -1.73
NFI1	YOR156C	RIF2	Q06208	395 aa		4.27	□□□□□ -1.73
NFI1	YOR156C	HMX1	P32339	317 aa		4.26	□□□□□ -1.73
NFI1	YOR156C	EFB1	P32471	206 aa	Known RBP	4.26	□□□□□ -1.73
NFI1	YOR156C	YMR310C	Q04867	317 aa	Predicted RBP	4.26	□□□□□ -1.73
NFI1	YOR156C	RPB5	P20434	215 aa		4.26	□□□□□ -1.73
NFI1	YOR156C	ZUO1	P32527	433 aa	Known RBP	4.26	□□□□□ -1.73
NFI1	YOR156C	SEC27	P41811	889 aa	Known RBP	4.26	□□□□□ -1.73
NFI1	YOR156C	MST27	P53176	234 aa		4.26	□□□□□ -1.73
NFI1	YOR156C	RRG7	Q08774	242 aa	Predicted RBP	4.26	□□□□□ -1.73
NFI1	YOR156C	FCY22	Q12119	530 aa		4.26	□□□□□ -1.73
NFI1	YOR156C	CKI1	P20485	582 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	HXT2	P23585	541 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	RAD5	P32849	1169 aa	Predicted RBP	4.25	□□□□□ -1.73
NFI1	YOR156C	SWD3	P38123	315 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	MAM33	P40513	266 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	BNS1	P50084	137 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	PRM6	Q04705	352 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	SCW10	Q04951	389 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	SPH1	Q06160	661 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	YPR091C	Q06833	770 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	YDL114W	Q07530	308 aa		4.25	□□□□□ -1.73
NFI1	YOR156C	NAM2	P11325	894 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	LIN1	P38852	340 aa	Predicted RBP	4.24	□□□□□ -1.73
NFI1	YOR156C	PTI1	P39927	425 aa	Predicted RBP	4.24	□□□□□ -1.73
NFI1	YOR156C	HST1	P53685	503 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	MGR3	Q04472	501 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	RSA1	Q08932	381 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	STF1	P01098	86 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	FAR1	P21268	830 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	ISY1	P21374	235 aa	Predicted RBP	4.24	□□□□□ -1.73
NFI1	YOR156C	FUN26	P31381	517 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	SRB2	P34162	210 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	IRC25	Q07951	179 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	HRT3	Q12347	344 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	IZH2	Q12442	317 aa		4.24	□□□□□ -1.73
NFI1	YOR156C	MEX67	Q99257	599 aa	Known RBP	4.24	□□□□□ -1.73
NFI1	YOR156C	DET1	Q99288	334 aa	Known RBP	4.24	□□□□□ -1.73
NFI1	YOR156C	ANR2	P36090	516 aa	Predicted RBP	4.23	□□□□□ -1.73
NFI1	YOR156C	SEC9	P40357	651 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	HAC1	P41546	238 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	YHC3	P47040	408 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	YLH47	Q06493	454 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	SHS1	Q07657	551 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	JID1	Q12350	301 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	SPO23	P33757	523 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	YHR131C	P38835	850 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	EGT2	P42835	1041 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	CTK3	P46963	296 aa	Predicted RBP	4.23	□□□□□ -1.73
NFI1	YOR156C	SMP3	Q04174	516 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	ARR1	Q06596	294 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	MFG1	Q07684	458 aa		4.23	□□□□□ -1.73
NFI1	YOR156C	CHA1	P25379	360 aa	Known RBP	4.22	□□□□□ -1.73
NFI1	YOR156C	SSE1	P32589	693 aa	Known RBP	4.22	□□□□□ -1.73
NFI1	YOR156C	ADA2	Q02336	434 aa		4.22	□□□□□ -1.73
NFI1	YOR156C	CMS1	Q07897	291 aa	Known RBP	4.22	□□□□□ -1.73
NFI1	YOR156C	PLP2	Q12017	286 aa		4.22	□□□□□ -1.73
NFI1	YOR156C	SUR1	P33300	382 aa		4.21	□□□□□ -1.73
NFI1	YOR156C	OSW5	P40219	148 aa		4.21	□□□□□ -1.73
NFI1	YOR156C	GLE1	Q12315	538 aa		4.21	□□□□□ -1.73
NFI1	YOR156C	PCL9	Q12477	304 aa		4.21	□□□□□ -1.73
NFI1	YOR156C	MXR2	P25566	168 aa		4.21	□□□□□ -1.74
NFI1	YOR156C	ATG7	P38862	630 aa		4.21	□□□□□ -1.74
NFI1	YOR156C	ALP1	P38971	573 aa		4.21	□□□□□ -1.74
NFI1	YOR156C	ATG18	P43601	500 aa		4.21	□□□□□ -1.74
NFI1	YOR156C	KEG1	P43614	200 aa		4.21	□□□□□ -1.74
NFI1	YOR156C	CIN2	P46670	268 aa		4.21	□□□□□ -1.74
NFI1	YOR156C	LST7	P53237	242 aa		4.21	□□□□□ -1.74
NFI1	YOR156C	RTC5	Q12108	567 aa	Known RBP	4.21	□□□□□ -1.74
NFI1	YOR156C	YDL199C	Q12407	687 aa		4.21	□□□□□ -1.74
NFI1	YOR156C	ECM8	P38246	354 aa		4.2	□□□□□ -1.74
NFI1	YOR156C	YMR134W	P40207	237 aa		4.2	□□□□□ -1.74
NFI1	YOR156C	CRH1	P53301	507 aa		4.2	□□□□□ -1.74
NFI1	YOR156C	ALF1	P53904	254 aa		4.2	□□□□□ -1.74
NFI1	YOR156C	NAT4	Q04751	285 aa		4.2	□□□□□ -1.74
NFI1	YOR156C	AIM10	P39965	576 aa	Known RBP	4.2	□□□□□ -1.74
NFI1	YOR156C	YFR057W	P43625	151 aa		4.2	□□□□□ -1.74
NFI1	YOR156C	TRF5	P48561	642 aa	Known RBP	4.2	□□□□□ -1.74
NFI1	YOR156C	VPS20	Q04272	221 aa		4.2	□□□□□ -1.74
NFI1	YOR156C	YOL075C	Q08234	1294 aa		4.2	□□□□□ -1.74
NFI1	YOR156C	HTZ1	Q12692	134 aa	Known RBP	4.2	□□□□□ -1.74
NFI1	YOR156C	MRPS5	P33759	307 aa		4.19	□□□□□ -1.74
NFI1	YOR156C	MRPL10	P36520	322 aa		4.19	□□□□□ -1.74
NFI1	YOR156C	YDR089W	P38966	869 aa		4.19	□□□□□ -1.74
NFI1	YOR156C	PRP39	P39682	629 aa	Known RBP	4.19	□□□□□ -1.74
NFI1	YOR156C	BIR1	P47134	954 aa		4.19	□□□□□ -1.74
NFI1	YOR156C	STE23	Q06010	1027 aa		4.19	□□□□□ -1.74
NFI1	YOR156C	UTR1	P21373	530 aa		4.19	□□□□□ -1.74
NFI1	YOR156C	RVS161	P25343	265 aa	Known RBP	4.19	□□□□□ -1.74
NFI1	YOR156C	CLD1	P53264	445 aa		4.19	□□□□□ -1.74
NFI1	YOR156C	YHC1	Q05900	231 aa	Known RBP	4.19	□□□□□ -1.74
NFI1	YOR156C	RBD2	Q12270	262 aa		4.19	□□□□□ -1.74
NFI1	YOR156C	SPO24	Q3E752	67 aa		4.19	□□□□□ -1.74
NFI1	YOR156C	GAL3	P13045	520 aa		4.18	□□□□□ -1.74
NFI1	YOR156C	HXT1	P32465	570 aa		4.18	□□□□□ -1.74
NFI1	YOR156C	PCH2	P38126	564 aa		4.18	□□□□□ -1.74
NFI1	YOR156C	IST2	P38250	946 aa		4.18	□□□□□ -1.74
NFI1	YOR156C	PES4	P39684	611 aa		4.18	□□□□□ -1.74
NFI1	YOR156C	YGL114W	P53134	725 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms