RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C UBA4P38820 440 aa5.01□□□□□ -1.61
RAT1YOR048C BTT1P40314 149 aaPredicted RBP5.01□□□□□ -1.61
RAT1YOR048C TED1P40533 473 aa5.01□□□□□ -1.61
RAT1YOR048C POP1P41812 875 aa5.01□□□□□ -1.61
RAT1YOR048C CAF16P43569 289 aa5.01□□□□□ -1.61
RAT1YOR048C SPO74P45819 413 aa5.01□□□□□ -1.61
RAT1YOR048C INN1P53901 409 aa5.01□□□□□ -1.61
RAT1YOR048C ARV1Q06541 321 aa5.01□□□□□ -1.61
RAT1YOR048C YOR283WQ12040 230 aaKnown RBP5.01□□□□□ -1.61
RAT1YOR048C DIN7Q12086 430 aa5.01□□□□□ -1.61
RAT1YOR048C BMT6Q12291 365 aa5.01□□□□□ -1.61
RAT1YOR048C MRX4Q12467 430 aa5.01□□□□□ -1.61
RAT1YOR048C AI3P03877 415 aa5□□□□□ -1.61
RAT1YOR048C CAR2P07991 424 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C SSA1P10591 642 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C ZWF1P11412 505 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C CPR2P23285 205 aa5□□□□□ -1.61
RAT1YOR048C BIO2P32451 375 aa5□□□□□ -1.61
RAT1YOR048C MGM101P32787 269 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C SRO77P38163 1010 aa5□□□□□ -1.61
RAT1YOR048C LYS12P40495 371 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C YMR178WQ03219 274 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C TRM82Q03774 444 aa5□□□□□ -1.61
RAT1YOR048C CIA1Q05583 330 aa5□□□□□ -1.61
RAT1YOR048C RRT8Q08219 342 aa5□□□□□ -1.61
RAT1YOR048C ATG41Q12048 136 aa5□□□□□ -1.61
RAT1YOR048C YPR022CQ12139 1133 aa5□□□□□ -1.61
RAT1YOR048C BSC1Q12140 328 aa5□□□□□ -1.61
RAT1YOR048C LAG2Q92325 660 aa5□□□□□ -1.61
RAT1YOR048C CDC9P04819 755 aa5□□□□□ -1.61
RAT1YOR048C SIR2P06700 562 aa5□□□□□ -1.61
RAT1YOR048C CPA1P07258 411 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C CHL1P22516 861 aaPredicted RBP5□□□□□ -1.61
RAT1YOR048C RPS1BP23248 255 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C VAM7P32912 316 aa5□□□□□ -1.61
RAT1YOR048C YPT52P36018 234 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C GMH1P36125 273 aa5□□□□□ -1.61
RAT1YOR048C TAE1P38340 232 aa5□□□□□ -1.61
RAT1YOR048C SAF1P38352 637 aa5□□□□□ -1.61
RAT1YOR048C BUD25P85052 153 aa5□□□□□ -1.61
RAT1YOR048C CTK1Q03957 528 aaKnown RBP5□□□□□ -1.61
RAT1YOR048C SEG1Q04279 960 aa5□□□□□ -1.61
RAT1YOR048C BUR2Q05949 395 aa5□□□□□ -1.61
RAT1YOR048C ATG10Q07879 167 aa5□□□□□ -1.61
RAT1YOR048C APC2Q12440 853 aa5□□□□□ -1.61
RAT1YOR048C ARE1P25628 610 aa4.99□□□□□ -1.61
RAT1YOR048C TAF14P35189 244 aa4.99□□□□□ -1.61
RAT1YOR048C MED6P38782 295 aa4.99□□□□□ -1.61
RAT1YOR048C LSB6P42951 607 aa4.99□□□□□ -1.61
RAT1YOR048C IDS2P46958 469 aa4.99□□□□□ -1.61
RAT1YOR048C MDM34P53083 459 aa4.99□□□□□ -1.61
RAT1YOR048C VPS62P53285 467 aa4.99□□□□□ -1.61
RAT1YOR048C YDR444WQ04093 687 aa4.99□□□□□ -1.61
RAT1YOR048C YLR224WQ05947 369 aa4.99□□□□□ -1.61
RAT1YOR048C MLC2Q06580 163 aa4.99□□□□□ -1.61
RAT1YOR048C GUP2Q08929 609 aa4.99□□□□□ -1.61
RAT1YOR048C YLR422WQ06409 1932 aa4.99□□□□□ -1.61
RAT1YOR048C CYC1P00044 109 aaPredicted RBP4.99□□□□□ -1.61
RAT1YOR048C PHO80P20052 293 aa4.99□□□□□ -1.61
RAT1YOR048C SKN1P33336 771 aa4.99□□□□□ -1.61
RAT1YOR048C OSH7P38755 437 aa4.99□□□□□ -1.61
RAT1YOR048C DMA1P38823 416 aa4.99□□□□□ -1.61
RAT1YOR048C PTH1P38876 190 aaKnown RBP4.99□□□□□ -1.61
RAT1YOR048C ISC1P40015 477 aaKnown RBP4.99□□□□□ -1.61
RAT1YOR048C YGR201CP42936 225 aa4.99□□□□□ -1.61
RAT1YOR048C PGA1P53896 198 aa4.99□□□□□ -1.61
RAT1YOR048C OST6Q03723 332 aa4.99□□□□□ -1.61
RAT1YOR048C ARG7Q04728 441 aa4.99□□□□□ -1.61
RAT1YOR048C TPO3Q06451 622 aa4.99□□□□□ -1.61
RAT1YOR048C RRP9Q06506 573 aaKnown RBP4.99□□□□□ -1.61
RAT1YOR048C MRPL35Q06678 367 aa4.99□□□□□ -1.61
RAT1YOR048C EAF3Q12432 401 aa4.99□□□□□ -1.61
RAT1YOR048C YJR112W-AQ3E743 109 aa4.99□□□□□ -1.61
RAT1YOR048C ADK1P07170 222 aaKnown RBP4.99□□□□□ -1.61
RAT1YOR048C PRB1P09232 635 aa4.99□□□□□ -1.61
RAT1YOR048C GPI12P23797 304 aa4.99□□□□□ -1.61
RAT1YOR048C MNE1P24720 663 aa4.99□□□□□ -1.61
RAT1YOR048C IML3P38265 245 aa4.99□□□□□ -1.61
RAT1YOR048C APQ12P40532 138 aa4.99□□□□□ -1.61
RAT1YOR048C CAT5P41735 233 aa4.99□□□□□ -1.61
RAT1YOR048C MRPS18P42847 217 aa4.99□□□□□ -1.61
RAT1YOR048C YAE1P47118 141 aaPredicted RBP4.99□□□□□ -1.61
RAT1YOR048C SAY1P53324 424 aa4.99□□□□□ -1.61
RAT1YOR048C IPI3P53877 555 aa4.99□□□□□ -1.61
RAT1YOR048C YPL068CQ02749 293 aa4.99□□□□□ -1.61
RAT1YOR048C SCS7Q03529 384 aa4.99□□□□□ -1.61
RAT1YOR048C DML1Q03652 475 aa4.99□□□□□ -1.61
RAT1YOR048C ROT1Q03691 256 aa4.99□□□□□ -1.61
RAT1YOR048C ELP6Q04868 273 aa4.99□□□□□ -1.61
RAT1YOR048C YOR365CQ08844 703 aa4.99□□□□□ -1.61
RAT1YOR048C FEX2Q08991 375 aa4.99□□□□□ -1.61
RAT1YOR048C NMD4Q12129 218 aa4.99□□□□□ -1.61
RAT1YOR048C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
RAT1YOR048C MTR10Q99189 972 aa4.99□□□□□ -1.61
RAT1YOR048C STT4P37297 1900 aa4.98□□□□□ -1.61
RAT1YOR048C YPR096CO13587 100 aa4.98□□□□□ -1.61
RAT1YOR048C PEP4P07267 405 aaKnown RBP4.98□□□□□ -1.61
RAT1YOR048C CKS1P20486 150 aaKnown RBP4.98□□□□□ -1.61
RAT1YOR048C PRP28P23394 588 aa4.98□□□□□ -1.61
RAT1YOR048C BOS1P25385 244 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms