RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	GSH1	P32477	678 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	RPD3	P32561	433 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	PRP18	P33411	251 aa	Predicted RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	VHC1	P38329	1120 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	NDT80	P38830	627 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	HXT6	P39003	570 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	HXT7	P39004	570 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	PAC2	P39937	518 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	GIM4	P40005	111 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	YJL068C	P40363	299 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	HPM1	P40481	377 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	MET28	P40573	187 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	CTK3	P46963	296 aa	Predicted RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	AIM22	P47051	409 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	COX16	P47081	118 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	CTR1	P49573	406 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	MND1	P53102	219 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	VHT1	P53241	593 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	MRPL50	P53724	139 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	TRM112	P53738	135 aa	Predicted RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	YNL140C	P53910	189 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	PET117	Q02771	107 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	YPL071C	Q02864	156 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	FMN1	Q03778	218 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	CTK1	Q03957	528 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	SNX41	Q04053	625 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	CRR1	Q05790	422 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	DCR2	Q05924	578 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	VPS74	Q06385	345 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	YDL114W	Q07530	308 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	FDH1	Q08911	376 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	PPT2	Q12036	173 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	SRO7	Q12038	1033 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	NSL1	Q12143	216 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	YLR108C	Q12259	485 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	PAA1	Q12447	191 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	SNF8	Q12483	233 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	YPR096C	O13587	100 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	HEM2	P05373	342 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	PHO4	P07270	312 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	GPA1	P08539	472 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	SSA3	P09435	649 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	NAM2	P11325	894 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	CDC23	P16522	626 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	YCR061W	P25639	631 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	MLF3	P32047	452 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	AAR2	P32357	355 aa	Predicted RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	SPR1	P32603	445 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	MID2	P36027	376 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	ECM31	P38122	312 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	DUG2	P38149	878 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	ARO9	P38840	513 aa	Predicted RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	SVP26	P38869	228 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	AST2	P39945	430 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	FCY21	P40039	528 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	PEX17	P40155	199 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	AYR1	P40471	297 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	SNM1	P40993	198 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	YFL054C	P43549	646 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	TMA22	P47089	198 aa	Predicted RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	BNA2	P47125	453 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	ASN1	P49089	572 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	YIP1	P53039	248 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	YGR053C	P53234	283 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	YGR054W	P53235	642 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	RTT102	P53330	157 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	GCN5	Q03330	439 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	SNU56	Q03782	492 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	ECM22	Q05958	814 aa	Predicted RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	YPR147C	Q06522	304 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	YLR030W	Q07967	263 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	RRP40	Q08285	240 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	GPM2	Q12008	311 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	YDL176W	Q12027	708 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	HAL9	Q12180	1030 aa		1.42	□□□□□ -2.18
SSK2	YNR031C	RIB2	Q12362	591 aa	Known RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	HSH49	Q99181	213 aa	Predicted RBP	1.42	□□□□□ -2.18
SSK2	YNR031C	MES1	P00958	751 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	1.41	□□□□□ -2.18	RIP-Chip
SSK2	YNR031C	MET17	P06106	444 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	CDC33	P07260	213 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	PDX1	P16451	410 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	PHO85	P17157	305 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	UTR1	P21373	530 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	CPR4	P25334	318 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	YCR016W	P25617	290 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	DBF4	P32325	704 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	VMA6	P32366	345 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	RIM1	P32445	135 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	SSE2	P32590	693 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	MDL1	P33310	695 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	SPC29	P33419	253 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	CLG1	P35190	452 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	ANR2	P36090	516 aa	Predicted RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	GMH1	P36125	273 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	ATG7	P38862	630 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	YHR182W	P38870	785 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	CCT2	P39076	527 aa	Known RBP	1.41	□□□□□ -2.18
SSK2	YNR031C	CEM1	P39525	442 aa		1.41	□□□□□ -2.18
SSK2	YNR031C	ISC1	P40015	477 aa	Known RBP	1.41	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms