RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C DBP6P53734 629 aaKnown RBP8.1□□□□□ -1.11
RPD3YNL330C MNT4P53745 580 aa8.1□□□□□ -1.11
RPD3YNL330C COS1P53822 381 aa8.1□□□□□ -1.11
RPD3YNL330C MSC1Q03104 513 aa8.1□□□□□ -1.11
RPD3YNL330C AIM36Q03798 255 aa8.1□□□□□ -1.11
RPD3YNL330C RPC11Q04307 110 aaPredicted RBP8.1□□□□□ -1.11
RPD3YNL330C VPS68Q12016 184 aa8.1□□□□□ -1.11
RPD3YNL330C BSC1Q12140 328 aa8.1□□□□□ -1.11
RPD3YNL330C RTR2Q12378 196 aa8.1□□□□□ -1.11
RPD3YNL330C CAR2P07991 424 aaKnown RBP8.09□□□□□ -1.11
RPD3YNL330C YOL163WP0CF20 169 aa8.09□□□□□ -1.11
RPD3YNL330C URK1P27515 501 aa8.09□□□□□ -1.11
RPD3YNL330C HYM1P32464 399 aa8.09□□□□□ -1.11
RPD3YNL330C TUL1P36096 758 aa8.09□□□□□ -1.11
RPD3YNL330C APT2P36973 181 aa8.09□□□□□ -1.11
RPD3YNL330C ASC1P38011 319 aaKnown RBP8.09□□□□□ -1.11
RPD3YNL330C SER3P40054 469 aa8.09□□□□□ -1.11
RPD3YNL330C FMC1P40491 155 aa8.09□□□□□ -1.11
RPD3YNL330C PFS2P42841 465 aaKnown RBP8.09□□□□□ -1.11
RPD3YNL330C SNX4P47057 423 aa8.09□□□□□ -1.11
RPD3YNL330C BPL1P48445 690 aaPredicted RBP8.09□□□□□ -1.11
RPD3YNL330C SGF73P53165 657 aa8.09□□□□□ -1.11
RPD3YNL330C CSL4P53859 292 aaPredicted RBP8.09□□□□□ -1.11
RPD3YNL330C LSM7P53905 115 aaKnown RBP8.09□□□□□ -1.11
RPD3YNL330C PHO92Q06390 306 aa8.09□□□□□ -1.11
RPD3YNL330C ATG10Q07879 167 aa8.09□□□□□ -1.11
RPD3YNL330C PCL9Q12477 304 aa8.09□□□□□ -1.11
RPD3YNL330C YPR064WQ12492 139 aa8.09□□□□□ -1.11
RPD3YNL330C CYC1P00044 109 aaPredicted RBP8.08□□□□□ -1.12
RPD3YNL330C SIR2P06700 562 aa8.08□□□□□ -1.12
RPD3YNL330C SEN2P16658 377 aa8.08□□□□□ -1.12
RPD3YNL330C MTC2P34246 357 aa8.08□□□□□ -1.12
RPD3YNL330C YBR137WP38276 179 aa8.08□□□□□ -1.12
RPD3YNL330C SAP30P38429 201 aa8.08□□□□□ -1.12
RPD3YNL330C SOL3P38858 249 aa8.08□□□□□ -1.12
RPD3YNL330C MET30P39014 640 aa8.08□□□□□ -1.12
RPD3YNL330C OSW5P40219 148 aa8.08□□□□□ -1.12
RPD3YNL330C UBC9P50623 157 aaPredicted RBP8.08□□□□□ -1.12
RPD3YNL330C MTO1P53070 669 aa8.08□□□□□ -1.12
RPD3YNL330C IMO32P53219 342 aa8.08□□□□□ -1.12
RPD3YNL330C MEP3P53390 489 aa8.08□□□□□ -1.12
RPD3YNL330C IMP4P53941 290 aaKnown RBP8.08□□□□□ -1.12
RPD3YNL330C MTQ1P53944 314 aa8.08□□□□□ -1.12
RPD3YNL330C MRPS16Q02608 121 aa8.08□□□□□ -1.12
RPD3YNL330C CTK1Q03957 528 aaKnown RBP8.08□□□□□ -1.12
RPD3YNL330C YMR310CQ04867 317 aaPredicted RBP8.08□□□□□ -1.12
RPD3YNL330C ELP6Q04868 273 aa8.08□□□□□ -1.12
RPD3YNL330C RSF1Q05043 376 aa8.08□□□□□ -1.12
RPD3YNL330C BUR2Q05949 395 aa8.08□□□□□ -1.12
RPD3YNL330C RAX1Q08760 435 aa8.08□□□□□ -1.12
RPD3YNL330C FRE5Q08908 694 aa8.08□□□□□ -1.12
RPD3YNL330C RRP12Q12754 1228 aaKnown RBP8.08□□□□□ -1.12
RPD3YNL330C MSB2P32334 1306 aa8.07□□□□□ -1.12
RPD3YNL330C MDM35O60200 86 aa8.07□□□□□ -1.12
RPD3YNL330C PET54P10834 293 aa8.07□□□□□ -1.12
RPD3YNL330C APN1P22936 367 aa8.07□□□□□ -1.12
RPD3YNL330C AHC2P25649 128 aa8.07□□□□□ -1.12
RPD3YNL330C ERG9P29704 444 aa8.07□□□□□ -1.12
RPD3YNL330C HOM6P31116 359 aaKnown RBP8.07□□□□□ -1.12
RPD3YNL330C NTH1P32356 751 aa8.07□□□□□ -1.12
RPD3YNL330C MCM7P38132 845 aa8.07□□□□□ -1.12
RPD3YNL330C BNA4P38169 460 aa8.07□□□□□ -1.12
RPD3YNL330C SHE1P38200 338 aa8.07□□□□□ -1.12
RPD3YNL330C RPS20P38701 121 aaKnown RBP8.07□□□□□ -1.12
RPD3YNL330C VMA7P39111 118 aa8.07□□□□□ -1.12
RPD3YNL330C MOB1P40484 314 aa8.07□□□□□ -1.12
RPD3YNL330C YJL049WP47048 450 aa8.07□□□□□ -1.12
RPD3YNL330C BAT2P47176 376 aaKnown RBP8.07□□□□□ -1.12
RPD3YNL330C COS10P52924 374 aa8.07□□□□□ -1.12
RPD3YNL330C MAL11P53048 616 aa8.07□□□□□ -1.12
RPD3YNL330C VPS73P53142 486 aaKnown RBP8.07□□□□□ -1.12
RPD3YNL330C BUD9P53226 547 aa8.07□□□□□ -1.12
RPD3YNL330C ATF2P53296 535 aa8.07□□□□□ -1.12
RPD3YNL330C ROT1Q03691 256 aa8.07□□□□□ -1.12
RPD3YNL330C ROY1Q04847 553 aa8.07□□□□□ -1.12
RPD3YNL330C BOP2Q06150 570 aa8.07□□□□□ -1.12
RPD3YNL330C ASR1Q06834 288 aa8.07□□□□□ -1.12
RPD3YNL330C PLB3Q08108 686 aa8.07□□□□□ -1.12
RPD3YNL330C RRP40Q08285 240 aaKnown RBP8.07□□□□□ -1.12
RPD3YNL330C YNG1Q08465 219 aa8.07□□□□□ -1.12
RPD3YNL330C MDM32Q12171 622 aa8.07□□□□□ -1.12
RPD3YNL330C PDH1Q12428 516 aaKnown RBP8.07□□□□□ -1.12
RPD3YNL330C YPR015CQ12531 247 aa8.07□□□□□ -1.12
RPD3YNL330C SLH1P53327 1967 aaKnown RBP8.07□□□□□ -1.12
RPD3YNL330C STT4P37297 1900 aa8.07□□□□□ -1.12
RPD3YNL330C INH1P01097 85 aa8.06□□□□□ -1.12
RPD3YNL330C RAS1P01119 309 aa8.06□□□□□ -1.12
RPD3YNL330C NCP1P16603 691 aaKnown RBP8.06□□□□□ -1.12
RPD3YNL330C NAR1P23503 491 aaKnown RBP8.06□□□□□ -1.12
RPD3YNL330C PRE7P23724 241 aaKnown RBP8.06□□□□□ -1.12
RPD3YNL330C ADE1P27616 306 aa8.06□□□□□ -1.12
RPD3YNL330C YJU2P28320 278 aaPredicted RBP8.06□□□□□ -1.12
RPD3YNL330C SSH4P32343 579 aa8.06□□□□□ -1.12
RPD3YNL330C RNP1P32385 249 aa8.06□□□□□ -1.12
RPD3YNL330C JEN1P36035 616 aa8.06□□□□□ -1.12
RPD3YNL330C TCD2P36101 447 aaKnown RBP8.06□□□□□ -1.12
RPD3YNL330C SRO77P38163 1010 aa8.06□□□□□ -1.12
RPD3YNL330C TAE1P38340 232 aa8.06□□□□□ -1.12
RPD3YNL330C YGR210CP42942 411 aa8.06□□□□□ -1.12
RPD3YNL330C QRI7P43122 407 aa8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms