RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W YPR091CQ06833 770 aa5.68□□□□□ -1.5
CAF40YNL288W RXT3Q07458 294 aa5.68□□□□□ -1.5
CAF40YNL288W HSP42Q12329 375 aa5.68□□□□□ -1.5
CAF40YNL288W YPT1P01123 206 aaKnown RBP5.67□□□□□ -1.5
CAF40YNL288W ZWF1P11412 505 aaKnown RBP5.67□□□□□ -1.5
CAF40YNL288W GAL3P13045 520 aa5.67□□□□□ -1.5
CAF40YNL288W GLK1P17709 500 aaKnown RBP5.67□□□□□ -1.5
CAF40YNL288W REC107P21651 314 aa5.67□□□□□ -1.5
CAF40YNL288W CLB3P24870 427 aa5.67□□□□□ -1.5
CAF40YNL288W MEF1P25039 761 aa5.67□□□□□ -1.5
CAF40YNL288W NGG1P32494 702 aa5.67□□□□□ -1.5
CAF40YNL288W ORC2P32833 620 aa5.67□□□□□ -1.5
CAF40YNL288W AUR1P36107 401 aaPredicted RBP5.67□□□□□ -1.5
CAF40YNL288W IFA38P38286 347 aa5.67□□□□□ -1.5
CAF40YNL288W TDP1P38319 544 aa5.67□□□□□ -1.5
CAF40YNL288W TSL1P38427 1098 aaKnown RBP5.67□□□□□ -1.5
CAF40YNL288W YHR218WP38899 603 aa5.67□□□□□ -1.5
CAF40YNL288W RSP5P39940 809 aaKnown RBP5.67□□□□□ -1.5
CAF40YNL288W RIC1P40395 1056 aa5.67□□□□□ -1.5
CAF40YNL288W DIM1P41819 318 aaKnown RBP5.67□□□□□ -1.5
CAF40YNL288W AAD10P47182 288 aa5.67□□□□□ -1.5
CAF40YNL288W GTF1P53260 183 aaPredicted RBP5.67□□□□□ -1.5
CAF40YNL288W DSL1P53847 754 aa5.67□□□□□ -1.5
CAF40YNL288W SMA2Q04658 369 aa5.67□□□□□ -1.5
CAF40YNL288W YPR174CQ06616 221 aaPredicted RBP5.67□□□□□ -1.5
CAF40YNL288W ASA1Q06822 443 aa5.67□□□□□ -1.5
CAF40YNL288W ULA1Q12059 462 aa5.67□□□□□ -1.5
CAF40YNL288W SKS1Q12505 502 aa5.67□□□□□ -1.5
CAF40YNL288W YOL087CQ99247 1116 aa5.67□□□□□ -1.5
CAF40YNL288W SLH1P53327 1967 aaKnown RBP5.67□□□□□ -1.5
CAF40YNL288W CSF1Q12150 2958 aa5.67□□□□□ -1.5
CAF40YNL288W RAD7P06779 565 aa5.66□□□□□ -1.5
CAF40YNL288W MER1P16523 270 aa5.66□□□□□ -1.5
CAF40YNL288W AAC3P18238 307 aa5.66□□□□□ -1.5
CAF40YNL288W DBP3P20447 523 aaKnown RBP5.66□□□□□ -1.5
CAF40YNL288W RPS1BP23248 255 aaKnown RBP5.66□□□□□ -1.5
CAF40YNL288W PEX3P28795 441 aa5.66□□□□□ -1.5
CAF40YNL288W MKK1P32490 508 aa5.66□□□□□ -1.5
CAF40YNL288W PTR2P32901 601 aa5.66□□□□□ -1.5
CAF40YNL288W PEX6P33760 1030 aa5.66□□□□□ -1.5
CAF40YNL288W TEF4P36008 412 aaKnown RBP5.66□□□□□ -1.5
CAF40YNL288W ZTA1P38230 334 aaKnown RBP5.66□□□□□ -1.5
CAF40YNL288W FES1P38260 290 aa5.66□□□□□ -1.5
CAF40YNL288W FAA2P39518 744 aa5.66□□□□□ -1.5
CAF40YNL288W ALB1P47019 175 aaPredicted RBP5.66□□□□□ -1.5
CAF40YNL288W APS3P47064 194 aa5.66□□□□□ -1.5
CAF40YNL288W ATP22P50273 684 aaPredicted RBP5.66□□□□□ -1.5
CAF40YNL288W CDH1P53197 566 aa5.66□□□□□ -1.5
CAF40YNL288W YNR068CP53754 272 aa5.66□□□□□ -1.5
CAF40YNL288W IGO1P53897 168 aa5.66□□□□□ -1.5
CAF40YNL288W SRP1Q02821 542 aaKnown RBP5.66□□□□□ -1.5
CAF40YNL288W YOL024WQ08172 172 aa5.66□□□□□ -1.5
CAF40YNL288W RRT8Q08219 342 aa5.66□□□□□ -1.5
CAF40YNL288W YOR365CQ08844 703 aa5.66□□□□□ -1.5
CAF40YNL288W AKR2Q12013 749 aa5.66□□□□□ -1.5
CAF40YNL288W BSC1Q12140 328 aa5.66□□□□□ -1.5
CAF40YNL288W HFA1P32874 2273 aa5.65□□□□□ -1.5
CAF40YNL288W YOR062CP36025 268 aa5.65□□□□□ -1.5
CAF40YNL288W YKL069WP36088 180 aa5.65□□□□□ -1.5
CAF40YNL288W SKG1P36169 355 aa5.65□□□□□ -1.5
CAF40YNL288W YBR241CP38142 488 aa5.65□□□□□ -1.5
CAF40YNL288W LAS21P40367 830 aa5.65□□□□□ -1.5
CAF40YNL288W UTP25P40498 721 aaKnown RBP5.65□□□□□ -1.5
CAF40YNL288W YIL067CP40514 678 aa5.65□□□□□ -1.5
CAF40YNL288W CUP9P41817 306 aa5.65□□□□□ -1.5
CAF40YNL288W YJR141WP47172 347 aaPredicted RBP5.65□□□□□ -1.5
CAF40YNL288W CSL4P53859 292 aaPredicted RBP5.65□□□□□ -1.5
CAF40YNL288W YNL095CP53932 642 aa5.65□□□□□ -1.5
CAF40YNL288W PEX12Q04370 399 aa5.65□□□□□ -1.5
CAF40YNL288W MDM30Q05930 598 aa5.65□□□□□ -1.5
CAF40YNL288W ARR1Q06596 294 aa5.65□□□□□ -1.5
CAF40YNL288W THP1Q08231 455 aa5.65□□□□□ -1.5
CAF40YNL288W SFM1Q12314 213 aa5.65□□□□□ -1.5
CAF40YNL288W MHF2Q3E829 80 aa5.65□□□□□ -1.5
CAF40YNL288W MDM12Q92328 271 aa5.65□□□□□ -1.5
CAF40YNL288W YSF3P0C074 85 aaPredicted RBP5.64□□□□□ -1.51
CAF40YNL288W CUP1-1P0CX80 61 aa5.64□□□□□ -1.51
CAF40YNL288W CUP1-2P0CX81 61 aa5.64□□□□□ -1.51
CAF40YNL288W ENA1P13587 1091 aa5.64□□□□□ -1.51
CAF40YNL288W CMK2P22517 447 aa5.64□□□□□ -1.51
CAF40YNL288W CTR86P25355 563 aa5.64□□□□□ -1.51
CAF40YNL288W PBN1P25580 416 aa5.64□□□□□ -1.51
CAF40YNL288W STP22P25604 385 aa5.64□□□□□ -1.51
CAF40YNL288W RIB1P38066 345 aa5.64□□□□□ -1.51
CAF40YNL288W ECM10P39987 644 aa5.64□□□□□ -1.51
CAF40YNL288W NOP9P47077 666 aaKnown RBP5.64□□□□□ -1.51
CAF40YNL288W YGR067CP53243 804 aa5.64□□□□□ -1.51
CAF40YNL288W YGR079WP53249 370 aa5.64□□□□□ -1.51
CAF40YNL288W ENA2Q01896 1091 aa5.64□□□□□ -1.51
CAF40YNL288W NAN1Q02931 896 aaKnown RBP5.64□□□□□ -1.51
CAF40YNL288W HMO1Q03973 246 aaKnown RBP5.64□□□□□ -1.51
CAF40YNL288W SPO77Q06134 477 aa5.64□□□□□ -1.51
CAF40YNL288W GPI11Q06636 219 aa5.64□□□□□ -1.51
CAF40YNL288W TPO4Q12256 659 aa5.64□□□□□ -1.51
CAF40YNL288W YDL199CQ12407 687 aa5.64□□□□□ -1.51
CAF40YNL288W PAR32Q12515 295 aaKnown RBP5.64□□□□□ -1.51
CAF40YNL288W ENA5Q12691 1091 aa5.64□□□□□ -1.51
CAF40YNL288W RPL24AP04449 155 aaKnown RBP5.63□□□□□ -1.51
CAF40YNL288W CBS1P14066 229 aa5.63□□□□□ -1.51
CAF40YNL288W THR1P17423 357 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms