RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	GOS1	P38736	223 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	YNG2	P38806	282 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	PLB1	P39105	664 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	SSP120	P39931	234 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	HAT2	P39984	401 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	BUR6	P40096	142 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	BAP3	P41815	604 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	SFH5	P47008	294 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	BIT61	P47041	543 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	YJR011C	P47086	261 aa	Predicted RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	BIR1	P47134	954 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	PHB2	P50085	310 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	SOL1	P50278	321 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	PEX31	P53203	462 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	COS1	P53822	381 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	TIM8	P57744	87 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	RPL6A	Q02326	176 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	SNU56	Q03782	492 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	TY1A-MR1	Q04215	440 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	RAD34	Q06665	692 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	YRA1	Q12159	226 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	TY1A-BL	Q12266	440 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	RIB2	Q12362	591 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	PTC5	Q12511	572 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	RGS2	Q99188	309 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	HSL1	P34244	1518 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	YDR157W	A0A023PZE8	133 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	YPT1	P01123	206 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	ZWF1	P11412	505 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	NHP6B	P11633	99 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	MRP13	P12686	339 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	CUP2	P15315	225 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	PPA2	P28239	310 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	RAD14	P28519	371 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	ARO7	P32178	256 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	SHP1	P34223	423 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	YBR137W	P38276	179 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	RRT2	P38332	387 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	WSC4	P38739	605 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	DHH1	P39517	506 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	SEO1	P39709	593 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	PAC2	P39937	518 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	MID1	P41821	548 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	ASG7	P46993	209 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	YAE1	P47118	141 aa	Predicted RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	YJR079W	P47126	109 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	COG7	P53195	279 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	COS6	P53344	381 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	SAE3	P89114	91 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	GIS4	Q04233	774 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	GMC1	Q04399	608 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	DAL4	Q04895	635 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	BUR2	Q05949	395 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	FRQ1	Q06389	190 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	APC9	Q12107	265 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	RPS21B	Q3E754	87 aa	Known RBP	3.14	□□□□□ -1.91
SQS1	YNL224C	YPR014C	Q6B0W2	109 aa		3.14	□□□□□ -1.91
SQS1	YNL224C	PDR10	P51533	1564 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	THP2	O13539	261 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	ADH2	P00331	348 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	AI1	P03875	834 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	HVG1	P0CE11	249 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	PET18	P25362	215 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	CYS4	P32582	507 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	MNS1	P32906	549 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	CST26	P38226	397 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	POP4	P38336	279 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	YAR028W	P39548	234 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	PDS1	P40316	373 aa	Predicted RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	YIL067C	P40514	678 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	CAK1	P43568	368 aa	Predicted RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	TRS85	P46944	698 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	DIE2	P50076	525 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	YGR079W	P53249	370 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	ACL4	Q03771	387 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	NAT4	Q04751	285 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	BER1	Q06688	274 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	OSW1	Q08692	278 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	FCY22	Q12119	530 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	YOR012W	Q12351	137 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	WTM1	Q12363	437 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	YPR1	Q12458	312 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	RIB3	Q99258	208 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	RPL6B	P05739	176 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	MTF1	P14908	341 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
SQS1	YNL224C	KIN82	P25341	720 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	AHC2	P25649	128 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	RFA3	P26755	122 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	IDH2	P28241	369 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	SBA1	P28707	216 aa	Known RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	EHD3	P28817	500 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
SQS1	YNL224C	MRPL15	P36523	253 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	DIA4	P38705	446 aa	Predicted RBP	3.13	□□□□□ -1.91
SQS1	YNL224C	CRG1	P38892	291 aa	RIP-Chip data	3.13	□□□□□ -1.91	not detected
SQS1	YNL224C	OXA1	P39952	402 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	COG3	P40094	801 aa		3.13	□□□□□ -1.91
SQS1	YNL224C	ELO3	P40319	345 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms