RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W YDR061WQ12298 539 aa1.95□□□□□ -2.1
DDR48YMR173W RNH203Q12338 110 aa1.95□□□□□ -2.1
DDR48YMR173W APC2Q12440 853 aa1.95□□□□□ -2.1
DDR48YMR173W RPL12AP0CX53 165 aaKnown RBP1.94□□□□□ -2.1
DDR48YMR173W RPL12BP0CX54 165 aa1.94□□□□□ -2.1
DDR48YMR173W FUR1P18562 216 aaKnown RBP1.94□□□□□ -2.1
DDR48YMR173W CHA1P25379 360 aaKnown RBP1.94□□□□□ -2.1
DDR48YMR173W ERV1P27882 189 aa1.94□□□□□ -2.1
DDR48YMR173W TOA1P32773 286 aa1.94□□□□□ -2.1
DDR48YMR173W GPI16P38875 610 aa1.94□□□□□ -2.1
DDR48YMR173W SPO73P40031 143 aa1.94□□□□□ -2.1
DDR48YMR173W CPR7P47103 393 aa1.94□□□□□ -2.1
DDR48YMR173W TCB2P48231 1178 aa1.94□□□□□ -2.1
DDR48YMR173W TRF5P48561 642 aaKnown RBP1.94□□□□□ -2.1
DDR48YMR173W TRM112P53738 135 aaPredicted RBP1.94□□□□□ -2.1
DDR48YMR173W REX2P54964 269 aaKnown RBP1.94□□□□□ -2.1
DDR48YMR173W ERB1Q04660 807 aaKnown RBP1.94□□□□□ -2.1
DDR48YMR173W MSC3Q05812 728 aa1.94□□□□□ -2.1
DDR48YMR173W YLR456WQ06199 204 aa1.94□□□□□ -2.1
DDR48YMR173W TIR4Q12218 487 aaPredicted RBP1.94□□□□□ -2.1
DDR48YMR173W LDB17Q12342 491 aa1.94□□□□□ -2.1
DDR48YMR173W CLB1P24868 471 aa1.93□□□□□ -2.1
DDR48YMR173W SHE3P38272 425 aaKnown RBP1.93□□□□□ -2.1
DDR48YMR173W FHL1P39521 936 aa1.93□□□□□ -2.1
DDR48YMR173W ATM1P40416 690 aa1.93□□□□□ -2.1
DDR48YMR173W COQ5P49017 307 aa1.93□□□□□ -2.1
DDR48YMR173W DIA1P54005 336 aa1.93□□□□□ -2.1
DDR48YMR173W URC2Q04411 772 aa1.93□□□□□ -2.1
DDR48YMR173W YLR177WQ06251 628 aa1.93□□□□□ -2.1
DDR48YMR173W NOP6Q07623 225 aaKnown RBP1.93□□□□□ -2.1
DDR48YMR173W HMS1Q12398 434 aa1.93□□□□□ -2.1
DDR48YMR173W TPK3P05986 398 aa1.92□□□□□ -2.1
DDR48YMR173W ASP3-2P0CX77 362 aa1.92□□□□□ -2.1
DDR48YMR173W ASP3-3P0CX78 362 aa1.92□□□□□ -2.1
DDR48YMR173W ASP3-4P0CX79 362 aa1.92□□□□□ -2.1
DDR48YMR173W ASP3-1P0CZ17 362 aa1.92□□□□□ -2.1
DDR48YMR173W ARF1P11076 181 aaKnown RBP1.92□□□□□ -2.1
DDR48YMR173W PDX1P16451 410 aa1.92□□□□□ -2.1
DDR48YMR173W LDS1P31379 325 aa1.92□□□□□ -2.1
DDR48YMR173W RIM1P32445 135 aaKnown RBP1.92□□□□□ -2.1
DDR48YMR173W ANP1P32629 500 aa1.92□□□□□ -2.1
DDR48YMR173W AGA2P32781 87 aa1.92□□□□□ -2.1
DDR48YMR173W PTK1P36002 662 aaPredicted RBP1.92□□□□□ -2.1
DDR48YMR173W ECM8P38246 354 aa1.92□□□□□ -2.1
DDR48YMR173W GEP4P38812 185 aa1.92□□□□□ -2.1
DDR48YMR173W CIN2P46670 268 aa1.92□□□□□ -2.1
DDR48YMR173W ABM1P47146 123 aa1.92□□□□□ -2.1
DDR48YMR173W PMT5P52867 743 aa1.92□□□□□ -2.1
DDR48YMR173W HST4P53688 370 aa1.92□□□□□ -2.1
DDR48YMR173W NDL1Q06568 189 aa1.92□□□□□ -2.1
DDR48YMR173W YPR195CQ06594 109 aa1.92□□□□□ -2.1
DDR48YMR173W UAF30Q08747 228 aa1.92□□□□□ -2.1
DDR48YMR173W VPS54Q12071 889 aa1.92□□□□□ -2.1
DDR48YMR173W RPC53P25441 422 aa1.91□□□□□ -2.1
DDR48YMR173W PDC2P32896 925 aa1.91□□□□□ -2.1
DDR48YMR173W DOA1P36037 715 aa1.91□□□□□ -2.1
DDR48YMR173W SMP1P38128 452 aa1.91□□□□□ -2.1
DDR48YMR173W ECM34P38728 170 aa1.91□□□□□ -2.1
DDR48YMR173W PAC11P40960 533 aa1.91□□□□□ -2.1
DDR48YMR173W PIB2P53191 635 aa1.91□□□□□ -2.1
DDR48YMR173W RPN14P53196 417 aa1.91□□□□□ -2.1
DDR48YMR173W UNG1P12887 359 aa1.9□□□□□ -2.11
DDR48YMR173W SLM5P25345 492 aaKnown RBP1.9□□□□□ -2.11
DDR48YMR173W RRP7P25368 297 aaPredicted RBP1.9□□□□□ -2.11
DDR48YMR173W NRP1P32770 719 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
DDR48YMR173W FRM2P37261 193 aa1.9□□□□□ -2.11
DDR48YMR173W SHE1P38200 338 aa1.9□□□□□ -2.11
DDR48YMR173W QDR3P38227 689 aa1.9□□□□□ -2.11
DDR48YMR173W YIR035CP40579 254 aa1.9□□□□□ -2.11
DDR48YMR173W SPC19Q03954 165 aa1.9□□□□□ -2.11
DDR48YMR173W RNA1P11745 407 aaKnown RBP1.89□□□□□ -2.11
DDR48YMR173W DBF4P32325 704 aa1.89□□□□□ -2.11
DDR48YMR173W LTV1P34078 463 aa1.89□□□□□ -2.11
DDR48YMR173W TRR2P38816 342 aa1.89□□□□□ -2.11
DDR48YMR173W HEM14P40012 539 aa1.89□□□□□ -2.11
DDR48YMR173W YGR111WP53265 400 aa1.89□□□□□ -2.11
DDR48YMR173W RTT102P53330 157 aa1.89□□□□□ -2.11
DDR48YMR173W ZRG17P53735 605 aa1.89□□□□□ -2.11
DDR48YMR173W YDR115WQ04598 105 aa1.89□□□□□ -2.11
DDR48YMR173W ECM7Q06200 448 aa1.89□□□□□ -2.11
DDR48YMR173W DDC1Q08949 612 aa1.89□□□□□ -2.11
DDR48YMR173W ATP16Q12165 160 aa1.89□□□□□ -2.11
DDR48YMR173W OPI3P05375 206 aa1.88□□□□□ -2.11
DDR48YMR173W HEM4P06174 275 aa1.88□□□□□ -2.11
DDR48YMR173W EPT1P22140 391 aa1.88□□□□□ -2.11
DDR48YMR173W ZIP1P31111 875 aa1.88□□□□□ -2.11
DDR48YMR173W FAD1P38913 306 aa1.88□□□□□ -2.11
DDR48YMR173W SEC27P41811 889 aaKnown RBP1.88□□□□□ -2.11
DDR48YMR173W YGR015CP53208 328 aa1.88□□□□□ -2.11
DDR48YMR173W CWC22P53333 577 aaKnown RBP1.88□□□□□ -2.11
DDR48YMR173W RNH201P53942 307 aa1.88□□□□□ -2.11
DDR48YMR173W SED5Q01590 340 aa1.88□□□□□ -2.11
DDR48YMR173W YDR541CQ03049 344 aa1.88□□□□□ -2.11
DDR48YMR173W RMT2Q03305 412 aa1.88□□□□□ -2.11
DDR48YMR173W FSH2Q05015 223 aa1.88□□□□□ -2.11
DDR48YMR173W ASA1Q06822 443 aa1.88□□□□□ -2.11
DDR48YMR173W AAD15Q08361 143 aa1.88□□□□□ -2.11
DDR48YMR173W SRO7Q12038 1033 aa1.88□□□□□ -2.11
DDR48YMR173W MDH1P17505 334 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
DDR48YMR173W PHO91P27514 894 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms