RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	STN1	P38960	494 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	MBB1	P39534	108 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	DIM1	P41819	318 aa	Known RBP	3.13	□□□□□ -1.91
RPN13	YLR421C	LAM5	P43560	674 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	MIG2	P53035	382 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	TAF6	P53040	516 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	MRM2	P53123	320 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	YTP1	P53584	459 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	RPL22B	P56628	122 aa	Known RBP	3.13	□□□□□ -1.91
RPN13	YLR421C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
RPN13	YLR421C	UTP6	Q02354	440 aa	Known RBP	3.13	□□□□□ -1.91
RPN13	YLR421C	SHR3	Q02774	210 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	FMN1	Q03778	218 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	SMP3	Q04174	516 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	FUS2	Q05670	677 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	MDM30	Q05930	598 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	DCS1	Q06151	350 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	YDL114W	Q07530	308 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	UIP4	Q08926	304 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	APC2	Q12440	853 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	RAD61	Q99359	647 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	COX3	P00420	269 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	COR1	P07256	457 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	PET494	P07390	489 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN13	YLR421C	RAP1	P11938	827 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	MSS116	P15424	664 aa	Known RBP	3.12	□□□□□ -1.91
RPN13	YLR421C	OM45	P16547	393 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	EXO70	P19658	623 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	RPB8	P20436	146 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	YCR016W	P25617	290 aa	Known RBP	3.12	□□□□□ -1.91
RPN13	YLR421C	PHO91	P27514	894 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	PPQ1	P32945	549 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	RPT5	P33297	434 aa	Known RBP	3.12	□□□□□ -1.91
RPN13	YLR421C	VPS21	P36017	210 aa	Known RBP	3.12	□□□□□ -1.91
RPN13	YLR421C	ASC1	P38011	319 aa	Known RBP	3.12	□□□□□ -1.91
RPN13	YLR421C	ARA1	P38115	344 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	MRX3	P38172	270 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	PCA1	P38360	1216 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	TIF5	P38431	405 aa	Known RBP	3.12	□□□□□ -1.91
RPN13	YLR421C	AVT6	P40074	448 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	MAM33	P40513	266 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	SNL1	P40548	159 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	VMA10	P48836	114 aa	Known RBP	3.12	□□□□□ -1.91
RPN13	YLR421C	RPN14	P53196	417 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	YGR126W	P53274	230 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	MMT1	Q03218	510 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	COX20	Q04935	205 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	SPH1	Q06160	661 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	SEC10	Q06245	871 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	YPR078C	Q06813	372 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	SMC5	Q08204	1093 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	SNX3	Q08826	162 aa	Known RBP	3.12	□□□□□ -1.91
RPN13	YLR421C	PPT2	Q12036	173 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	MDY2	Q12285	212 aa		3.12	□□□□□ -1.91
RPN13	YLR421C	SUC2	P00724	532 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	SCEI	P03882	235 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	REV1	P12689	985 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	HEM15	P16622	393 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	STF2	P16965	84 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	COQ1	P18900	473 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	MRPL25	P23369	157 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	RRT12	P25381	491 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	MRPL40	P36534	297 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	DUG2	P38149	878 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	TRM5	P38793	499 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	ANS1	P38832	159 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	YHR131C	P38835	850 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	LCP5	P40079	357 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN13	YLR421C	YIL089W	P40500	205 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	GCD14	P46959	383 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN13	YLR421C	RPA34	P47006	233 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN13	YLR421C	HAM1	P47119	197 aa	Known RBP	3.11	□□□□□ -1.91
RPN13	YLR421C	TRF5	P48561	642 aa	Known RBP	3.11	□□□□□ -1.91
RPN13	YLR421C	RTC4	P53850	401 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	AQR1	P53943	586 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	RSM23	Q01163	450 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	YDR476C	Q03362	224 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	SYO1	Q07395	620 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	YDL218W	Q07629	317 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	EMP46	Q12396	444 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	CEX1	Q12453	761 aa		3.11	□□□□□ -1.91
RPN13	YLR421C	NOT5	Q12514	560 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN13	YLR421C	YLR462W	O13556	202 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	ADE4	P04046	510 aa	Known RBP	3.1	□□□□□ -1.91
RPN13	YLR421C	NMT1	P14743	455 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	CBF1	P17106	351 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	ATP10	P18496	279 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	RPS5	P26783	225 aa	Known RBP	3.1	□□□□□ -1.91
RPN13	YLR421C	PRP21	P32524	280 aa	Predicted RBP	3.1	□□□□□ -1.91
RPN13	YLR421C	MSN2	P33748	704 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	CLG1	P35190	452 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	AVT5	P38176	459 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	TCM62	P38228	572 aa	Known RBP	3.1	□□□□□ -1.91
RPN13	YLR421C	MMS4	P38257	691 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	YHL049C	P38722	271 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	FAD1	P38913	306 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	PHO90	P39535	881 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	YEL075C	P39972	122 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	YER189W	P40104	122 aa		3.1	□□□□□ -1.91
RPN13	YLR421C	YFL064C	P43540	174 aa		3.1	□□□□□ -1.91

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