RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W ARR1Q06596 294 aa4.42□□□□□ -1.7
VPS36YLR417W PDR5P33302 1511 aaKnown RBP4.42□□□□□ -1.7
VPS36YLR417W PHA2P32452 334 aa4.41□□□□□ -1.7
VPS36YLR417W ALP1P38971 573 aa4.41□□□□□ -1.7
VPS36YLR417W MPP10P47083 593 aaKnown RBP4.41□□□□□ -1.7
VPS36YLR417W MSC3Q05812 728 aa4.41□□□□□ -1.7
VPS36YLR417W MDM36Q06820 579 aa4.41□□□□□ -1.7
VPS36YLR417W YOR338WQ99326 363 aa4.41□□□□□ -1.7
VPS36YLR417W MMS1Q06211 1407 aa4.41□□□□□ -1.7
VPS36YLR417W ATG2P53855 1592 aa4.41□□□□□ -1.7
VPS36YLR417W RPC40P07703 335 aaKnown RBP4.41□□□□□ -1.7
VPS36YLR417W GAL3P13045 520 aa4.41□□□□□ -1.7
VPS36YLR417W AGA1P32323 725 aa4.41□□□□□ -1.7
VPS36YLR417W VAM7P32912 316 aa4.41□□□□□ -1.7
VPS36YLR417W PRP39P39682 629 aaKnown RBP4.41□□□□□ -1.7
VPS36YLR417W YHC3P47040 408 aa4.41□□□□□ -1.7
VPS36YLR417W COS1P53822 381 aa4.41□□□□□ -1.7
VPS36YLR417W ESA1Q08649 445 aa4.41□□□□□ -1.7
VPS36YLR417W VPS63O13549 108 aa4.4□□□□□ -1.71
VPS36YLR417W RPS16AP0CX51 143 aaKnown RBP4.4□□□□□ -1.71
VPS36YLR417W RPS16BP0CX52 143 aaKnown RBP4.4□□□□□ -1.71
VPS36YLR417W DBP3P20447 523 aaKnown RBP4.4□□□□□ -1.71
VPS36YLR417W CKI1P20485 582 aa4.4□□□□□ -1.71
VPS36YLR417W MNS1P32906 549 aa4.4□□□□□ -1.71
VPS36YLR417W GPX2P38143 162 aa4.4□□□□□ -1.71
VPS36YLR417W GEP4P38812 185 aa4.4□□□□□ -1.71
VPS36YLR417W COX14P39103 70 aa4.4□□□□□ -1.71
VPS36YLR417W YMR134WP40207 237 aa4.4□□□□□ -1.71
VPS36YLR417W VTI1Q04338 217 aa4.4□□□□□ -1.71
VPS36YLR417W RRN11Q04712 507 aa4.4□□□□□ -1.71
VPS36YLR417W STE23Q06010 1027 aa4.4□□□□□ -1.71
VPS36YLR417W NDD1Q08887 554 aa4.4□□□□□ -1.71
VPS36YLR417W TIP41Q12199 356 aa4.4□□□□□ -1.71
VPS36YLR417W YBR298C-AQ8TGK4 73 aa4.4□□□□□ -1.71
VPS36YLR417W SNT2P53127 1403 aa4.39□□□□□ -1.71
VPS36YLR417W SDH3P33421 198 aa4.39□□□□□ -1.71
VPS36YLR417W TIR2P33890 251 aa4.39□□□□□ -1.71
VPS36YLR417W MRPL40P36534 297 aa4.39□□□□□ -1.71
VPS36YLR417W MNN9P39107 395 aaKnown RBP4.39□□□□□ -1.71
VPS36YLR417W SEC9P40357 651 aa4.39□□□□□ -1.71
VPS36YLR417W NCA3P46955 337 aa4.39□□□□□ -1.71
VPS36YLR417W YDR262WQ12331 272 aa4.39□□□□□ -1.71
VPS36YLR417W YCL021W-AQ96VH3 125 aa4.39□□□□□ -1.71
VPS36YLR417W YLL053CP0CD98 152 aa4.38□□□□□ -1.71
VPS36YLR417W SSE1P32589 693 aaKnown RBP4.38□□□□□ -1.71
VPS36YLR417W SBE22P38814 852 aa4.38□□□□□ -1.71
VPS36YLR417W AIM20P40451 204 aa4.38□□□□□ -1.71
VPS36YLR417W WWM1P43582 211 aaKnown RBP4.38□□□□□ -1.71
VPS36YLR417W YFR018CP43599 363 aa4.38□□□□□ -1.71
VPS36YLR417W TRM112P53738 135 aaPredicted RBP4.38□□□□□ -1.71
VPS36YLR417W YLR297WQ05899 129 aa4.38□□□□□ -1.71
VPS36YLR417W CUR1Q06469 252 aa4.38□□□□□ -1.71
VPS36YLR417W SHS1Q07657 551 aa4.38□□□□□ -1.71
VPS36YLR417W LOT6Q07923 191 aa4.38□□□□□ -1.71
VPS36YLR417W YOL075CQ08234 1294 aa4.38□□□□□ -1.71
VPS36YLR417W YIL002W-AQ3E7Z5 69 aa4.38□□□□□ -1.71
VPS36YLR417W TY3B-IQ7LHG5 1498 aaKnown RBP4.38□□□□□ -1.71
VPS36YLR417W GCN2P15442 1659 aa4.38□□□□□ -1.71
VPS36YLR417W DNF1P32660 1571 aa4.38□□□□□ -1.71
VPS36YLR417W CPR4P25334 318 aa4.38□□□□□ -1.71
VPS36YLR417W PRM5P40476 318 aa4.38□□□□□ -1.71
VPS36YLR417W YIL029CP40538 142 aa4.38□□□□□ -1.71
VPS36YLR417W ABM1P47146 123 aa4.38□□□□□ -1.71
VPS36YLR417W HER2Q03557 464 aa4.38□□□□□ -1.71
VPS36YLR417W SMP3Q04174 516 aa4.38□□□□□ -1.71
VPS36YLR417W AHC1Q12433 566 aa4.38□□□□□ -1.71
VPS36YLR417W END3P39013 349 aa4.37□□□□□ -1.71
VPS36YLR417W YAT2P40017 923 aa4.37□□□□□ -1.71
VPS36YLR417W RTT105P40063 208 aa4.37□□□□□ -1.71
VPS36YLR417W LOC1P43586 204 aaPredicted RBP4.37□□□□□ -1.71
VPS36YLR417W MRM2P53123 320 aa4.37□□□□□ -1.71
VPS36YLR417W MTM1P53320 366 aa4.37□□□□□ -1.71
VPS36YLR417W YRM1Q12340 786 aa4.37□□□□□ -1.71
VPS36YLR417W PFK27Q12471 397 aaPredicted RBP4.37□□□□□ -1.71
VPS36YLR417W SPO24Q3E752 67 aa4.37□□□□□ -1.71
VPS36YLR417W MEX67Q99257 599 aaKnown RBP4.37□□□□□ -1.71
VPS36YLR417W GEA2P39993 1459 aaKnown RBP4.36□□□□□ -1.71
VPS36YLR417W CYC3P06182 269 aa4.36□□□□□ -1.71
VPS36YLR417W PIS1P06197 220 aaKnown RBP4.36□□□□□ -1.71
VPS36YLR417W MXR2P25566 168 aa4.36□□□□□ -1.71
VPS36YLR417W RAD5P32849 1169 aaPredicted RBP4.36□□□□□ -1.71
VPS36YLR417W SEC27P41811 889 aaKnown RBP4.36□□□□□ -1.71
VPS36YLR417W NUP116Q02630 1113 aa4.36□□□□□ -1.71
VPS36YLR417W EGD1Q02642 157 aaKnown RBP4.36□□□□□ -1.71
VPS36YLR417W PRM6Q04705 352 aa4.36□□□□□ -1.71
VPS36YLR417W YDL144CQ07589 356 aa4.36□□□□□ -1.71
VPS36YLR417W APC5Q08683 685 aa4.36□□□□□ -1.71
VPS36YLR417W YER078W-AQ3E7A2 54 aa4.36□□□□□ -1.71
VPS36YLR417W RGS2Q99188 309 aa4.36□□□□□ -1.71
VPS36YLR417W TY3B-GQ99315 1547 aa4.36□□□□□ -1.71
VPS36YLR417W ULS1Q08562 1619 aa4.36□□□□□ -1.71
VPS36YLR417W TRP1P00912 224 aa4.35□□□□□ -1.71
VPS36YLR417W KAR9P32526 644 aa4.35□□□□□ -1.71
VPS36YLR417W MRPS5P33759 307 aa4.35□□□□□ -1.71
VPS36YLR417W RTC2P38279 296 aa4.35□□□□□ -1.71
VPS36YLR417W SWC5P38326 303 aa4.35□□□□□ -1.71
VPS36YLR417W YHK8P38776 514 aa4.35□□□□□ -1.71
VPS36YLR417W CCT4P39078 528 aaKnown RBP4.35□□□□□ -1.71
VPS36YLR417W YIL067CP40514 678 aa4.35□□□□□ -1.71
VPS36YLR417W ALF1P53904 254 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms