RNA–Protein interactions for RNA: YLL055W

YCT1, Transcript of High-affinity cysteine-specific transporter, yeast

Gene YCT1, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCT1	YLL055W	RPN5	Q12250	445 aa	Known RBP	2.54	□□□□□ -2
YCT1	YLL055W	YOP1	Q12402	180 aa		2.54	□□□□□ -2
YCT1	YLL055W	TPK3	P05986	398 aa		2.53	□□□□□ -2
YCT1	YLL055W	ARF1	P11076	181 aa	Known RBP	2.53	□□□□□ -2
YCT1	YLL055W	CDC50	P25656	391 aa		2.53	□□□□□ -2
YCT1	YLL055W	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.53	□□□□□ -2	not detected
YCT1	YLL055W	MSP1	P28737	362 aa		2.53	□□□□□ -2
YCT1	YLL055W	IES6	P32617	166 aa		2.53	□□□□□ -2
YCT1	YLL055W	YEL043W	P32618	956 aa		2.53	□□□□□ -2
YCT1	YLL055W	YSC83	P32792	385 aa		2.53	□□□□□ -2
YCT1	YLL055W	MID2	P36027	376 aa		2.53	□□□□□ -2
YCT1	YLL055W	DOA1	P36037	715 aa		2.53	□□□□□ -2
YCT1	YLL055W	MCR1	P36060	302 aa	Known RBP	2.53	□□□□□ -2
YCT1	YLL055W	EFM4	P40516	257 aa		2.53	□□□□□ -2
YCT1	YLL055W	TOS2	P50078	622 aa		2.53	□□□□□ -2
YCT1	YLL055W	MLC1	P53141	149 aa		2.53	□□□□□ -2
YCT1	YLL055W	HST1	P53685	503 aa		2.53	□□□□□ -2
YCT1	YLL055W	TRM112	P53738	135 aa	Predicted RBP	2.53	□□□□□ -2
YCT1	YLL055W	YDR541C	Q03049	344 aa		2.53	□□□□□ -2
YCT1	YLL055W	URC2	Q04411	772 aa		2.53	□□□□□ -2
YCT1	YLL055W	YMR111C	Q04461	462 aa	Predicted RBP	2.53	□□□□□ -2
YCT1	YLL055W	MFG1	Q07684	458 aa		2.53	□□□□□ -2
YCT1	YLL055W	FCY22	Q12119	530 aa		2.53	□□□□□ -2
YCT1	YLL055W	GPX2	P38143	162 aa		2.53	□□□□□ -2.01
YCT1	YLL055W	SIF2	P38262	535 aa		2.53	□□□□□ -2.01
YCT1	YLL055W	YER186C	P40101	306 aa		2.53	□□□□□ -2.01
YCT1	YLL055W	PMT5	P52867	743 aa		2.53	□□□□□ -2.01
YCT1	YLL055W	RRN9	P53437	365 aa		2.53	□□□□□ -2.01
YCT1	YLL055W	YDL114W	Q07530	308 aa		2.53	□□□□□ -2.01
YCT1	YLL055W	COX4	P04037	155 aa		2.52	□□□□□ -2.01
YCT1	YLL055W	RPC40	P07703	335 aa	Known RBP	2.52	□□□□□ -2.01
YCT1	YLL055W	DAL80	P26343	269 aa		2.52	□□□□□ -2.01
YCT1	YLL055W	ECM8	P38246	354 aa		2.52	□□□□□ -2.01
YCT1	YLL055W	GEP4	P38812	185 aa		2.52	□□□□□ -2.01
YCT1	YLL055W	SKI8	Q02793	397 aa	Predicted RBP	2.52	□□□□□ -2.01
YCT1	YLL055W	ASA1	Q06822	443 aa		2.52	□□□□□ -2.01
YCT1	YLL055W	RTC5	Q12108	567 aa	Known RBP	2.52	□□□□□ -2.01
YCT1	YLL055W	YDR061W	Q12298	539 aa		2.52	□□□□□ -2.01
YCT1	YLL055W	NBL1	Q3E7Y6	73 aa		2.52	□□□□□ -2.01
YCT1	YLL055W	PSK1	P31374	1356 aa		2.51	□□□□□ -2.01
YCT1	YLL055W	SSE1	P32589	693 aa	Known RBP	2.51	□□□□□ -2.01
YCT1	YLL055W	TIR2	P33890	251 aa		2.51	□□□□□ -2.01
YCT1	YLL055W	YIL089W	P40500	205 aa		2.51	□□□□□ -2.01
YCT1	YLL055W	EPL1	P43572	832 aa		2.51	□□□□□ -2.01
YCT1	YLL055W	RTT102	P53330	157 aa		2.51	□□□□□ -2.01
YCT1	YLL055W	ARP5	P53946	755 aa		2.51	□□□□□ -2.01
YCT1	YLL055W	MRPS16	Q02608	121 aa		2.51	□□□□□ -2.01
YCT1	YLL055W	DBP9	Q06218	594 aa	Known RBP	2.51	□□□□□ -2.01
YCT1	YLL055W	RLP24	Q07915	199 aa	Known RBP	2.51	□□□□□ -2.01
YCT1	YLL055W	DNL4	Q08387	944 aa	Predicted RBP	2.51	□□□□□ -2.01
YCT1	YLL055W	PCL9	Q12477	304 aa		2.51	□□□□□ -2.01
YCT1	YLL055W	FUN26	P31381	517 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	TOA2	P32774	122 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	MNL1	P38888	796 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	TIM17	P39515	158 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	RTT105	P40063	208 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	AIP1	P46680	615 aa	Known RBP	2.5	□□□□□ -2.01
YCT1	YLL055W	MKC7	P53379	596 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.5	□□□□□ -2.01	not detected
YCT1	YLL055W	VHS1	Q03785	461 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	YFH1	Q07540	174 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	LDS2	Q08218	356 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	AAD15	Q08361	143 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	PSY3	Q12318	242 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	YDL199C	Q12407	687 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	YDL012C	Q12489	107 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	TFB5	Q3E7C1	72 aa	Predicted RBP	2.5	□□□□□ -2.01
YCT1	YLL055W	YIL002W-A	Q3E7Z5	69 aa		2.5	□□□□□ -2.01
YCT1	YLL055W	PRB1	P09232	635 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	ZRC1	P20107	442 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	SRB2	P34162	210 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	GPI18	P38211	433 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	KAP104	P38217	918 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	PFF1	P38244	976 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	YSW1	P38280	609 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	PFS1	P38872	237 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	NAS2	P40555	220 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	ERV25	P54837	211 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	MDY2	Q12285	212 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	RNA1	P11745	407 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	TAL1	P15019	335 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	OM45	P16547	393 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	DEP1	P31385	405 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	SUR1	P33300	382 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	SPO23	P33757	523 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	MLH1	P38920	769 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	VPS45	P38932	577 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	SEO1	P39709	593 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	ALD5	P40047	520 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	RPA34	P47006	233 aa	Predicted RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	ASN2	P49090	572 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	SHE4	P51534	789 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	YPS5	P53057	165 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	CUE3	P53137	624 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	PDR16	P53860	351 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	SPH1	Q06160	661 aa		2.49	□□□□□ -2.01
YCT1	YLL055W	NOP6	Q07623	225 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	MEX67	Q99257	599 aa	Known RBP	2.49	□□□□□ -2.01
YCT1	YLL055W	DAP2	P18962	818 aa		2.48	□□□□□ -2.01
YCT1	YLL055W	GRR1	P24814	1151 aa		2.48	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms