RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS51, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS51YKR020W RPA49Q01080 415 aaPredicted RBP2.42□□□□□ -2.02
VPS51YKR020W BET5Q03630 159 aa2.42□□□□□ -2.02
VPS51YKR020W ARX1Q03862 593 aaKnown RBP2.42□□□□□ -2.02
VPS51YKR020W FUS2Q05670 677 aa2.42□□□□□ -2.02
VPS51YKR020W VTA1Q06263 330 aa2.42□□□□□ -2.02
VPS51YKR020W SMC5Q08204 1093 aa2.42□□□□□ -2.02
VPS51YKR020W YRM1Q12340 786 aa2.42□□□□□ -2.02
VPS51YKR020W AFI1Q99222 893 aa2.42□□□□□ -2.02
VPS51YKR020W DDP1Q99321 188 aaKnown RBP2.42□□□□□ -2.02
VPS51YKR020W TOM1Q03280 3268 aa2.42□□□□□ -2.02
VPS51YKR020W LAA1P39526 2014 aa2.41□□□□□ -2.02
VPS51YKR020W CYC3P06182 269 aa2.41□□□□□ -2.02
VPS51YKR020W TCP1P12612 559 aaKnown RBP2.41□□□□□ -2.02
VPS51YKR020W SRV2P17555 526 aaKnown RBP2.41□□□□□ -2.02
VPS51YKR020W SPO7P18410 259 aa2.41□□□□□ -2.02
VPS51YKR020W CLN1P20437 546 aa2.41□□□□□ -2.02
VPS51YKR020W REC107P21651 314 aa2.41□□□□□ -2.02
VPS51YKR020W RHB1P25378 209 aa2.41□□□□□ -2.02
VPS51YKR020W YCR051WP25631 222 aa2.41□□□□□ -2.02
VPS51YKR020W POT1P27796 417 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
VPS51YKR020W ERV1P27882 189 aa2.41□□□□□ -2.02
VPS51YKR020W RME1P32338 300 aaKnown RBP2.41□□□□□ -2.02
VPS51YKR020W TFB1P32776 642 aa2.41□□□□□ -2.02
VPS51YKR020W MDL1P33310 695 aa2.41□□□□□ -2.02
VPS51YKR020W HCS1P34243 683 aa2.41□□□□□ -2.02
VPS51YKR020W DRE2P36152 348 aa2.41□□□□□ -2.02
VPS51YKR020W TVP23P38962 199 aa2.41□□□□□ -2.02
VPS51YKR020W GDI1P39958 451 aaKnown RBP2.41□□□□□ -2.02
VPS51YKR020W RSM25P40496 264 aa2.41□□□□□ -2.02
VPS51YKR020W DLD2P46681 530 aaKnown RBP2.41□□□□□ -2.02
VPS51YKR020W YJL055WP47044 245 aa2.41□□□□□ -2.02
VPS51YKR020W AZR1P50080 613 aa2.41□□□□□ -2.02
VPS51YKR020W RTT102P53330 157 aa2.41□□□□□ -2.02
VPS51YKR020W RSN1Q03516 953 aa2.41□□□□□ -2.02
VPS51YKR020W ROY1Q04847 553 aa2.41□□□□□ -2.02
VPS51YKR020W YDR286CQ05530 114 aa2.41□□□□□ -2.02
VPS51YKR020W IRC25Q07951 179 aa2.41□□□□□ -2.02
VPS51YKR020W IES4Q08561 116 aa2.41□□□□□ -2.02
VPS51YKR020W HIF1Q12373 385 aa2.41□□□□□ -2.02
VPS51YKR020W ISN1Q99312 450 aa2.41□□□□□ -2.02
VPS51YKR020W ILV5P06168 395 aaKnown RBP2.4□□□□□ -2.03
VPS51YKR020W URA7P28274 579 aaKnown RBP2.4□□□□□ -2.03
VPS51YKR020W PSO2P30620 661 aa2.4□□□□□ -2.03
VPS51YKR020W YSC83P32792 385 aa2.4□□□□□ -2.03
VPS51YKR020W COT1P32798 439 aa2.4□□□□□ -2.03
VPS51YKR020W ALD5P40047 520 aaKnown RBP2.4□□□□□ -2.03
VPS51YKR020W SEC28P40509 296 aaKnown RBP2.4□□□□□ -2.03
VPS51YKR020W YFL040WP43562 540 aa2.4□□□□□ -2.03
VPS51YKR020W TOS3P43637 560 aa2.4□□□□□ -2.03
VPS51YKR020W ATP22P50273 684 aaPredicted RBP2.4□□□□□ -2.03
VPS51YKR020W NBP1P52919 319 aaPredicted RBP2.4□□□□□ -2.03
VPS51YKR020W YNL146WP53906 100 aa2.4□□□□□ -2.03
VPS51YKR020W OAZ1Q02803 292 aa2.4□□□□□ -2.03
VPS51YKR020W RRP45Q05636 305 aaKnown RBP2.4□□□□□ -2.03
VPS51YKR020W YOL075CQ08234 1294 aa2.4□□□□□ -2.03
VPS51YKR020W FDH1Q08911 376 aa2.4□□□□□ -2.03
VPS51YKR020W VAM3Q12241 283 aa2.4□□□□□ -2.03
VPS51YKR020W ORT1Q12375 292 aa2.4□□□□□ -2.03
VPS51YKR020W ADE4P04046 510 aaKnown RBP2.39□□□□□ -2.03
VPS51YKR020W RPL22AP05749 121 aaKnown RBP2.39□□□□□ -2.03
VPS51YKR020W SEC63P14906 663 aa2.39□□□□□ -2.03
VPS51YKR020W OM45P16547 393 aa2.39□□□□□ -2.03
VPS51YKR020W MDH1P17505 334 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
VPS51YKR020W RRP7P25368 297 aaPredicted RBP2.39□□□□□ -2.03
VPS51YKR020W SIN4P32259 974 aa2.39□□□□□ -2.03
VPS51YKR020W RPS0AP32905 252 aaKnown RBP2.39□□□□□ -2.03
VPS51YKR020W EFM4P40516 257 aa2.39□□□□□ -2.03
VPS51YKR020W YJR011CP47086 261 aaPredicted RBP2.39□□□□□ -2.03
VPS51YKR020W TCB2P48231 1178 aa2.39□□□□□ -2.03
VPS51YKR020W MDM30Q05930 598 aa2.39□□□□□ -2.03
VPS51YKR020W CUR1Q06469 252 aa2.39□□□□□ -2.03
VPS51YKR020W SHS1Q07657 551 aa2.39□□□□□ -2.03
VPS51YKR020W SMF3Q12078 473 aaPredicted RBP2.39□□□□□ -2.03
VPS51YKR020W GPM3Q12326 303 aa2.39□□□□□ -2.03
VPS51YKR020W YLR422WQ06409 1932 aa2.38□□□□□ -2.03
VPS51YKR020W COX4P04037 155 aa2.38□□□□□ -2.03
VPS51YKR020W CDC37P06101 506 aaKnown RBP2.38□□□□□ -2.03
VPS51YKR020W RPL4AP10664 362 aaKnown RBP2.38□□□□□ -2.03
VPS51YKR020W RML2P32611 393 aa2.38□□□□□ -2.03
VPS51YKR020W SKG6P32900 734 aaPredicted RBP2.38□□□□□ -2.03
VPS51YKR020W CSE2P33308 149 aa2.38□□□□□ -2.03
VPS51YKR020W SOR1P35497 357 aaKnown RBP2.38□□□□□ -2.03
VPS51YKR020W RPC25P35718 212 aa2.38□□□□□ -2.03
VPS51YKR020W YET1P35723 206 aa2.38□□□□□ -2.03
VPS51YKR020W NTC20P38302 140 aaPredicted RBP2.38□□□□□ -2.03
VPS51YKR020W SPT8P38915 602 aa2.38□□□□□ -2.03
VPS51YKR020W AIP1P46680 615 aaKnown RBP2.38□□□□□ -2.03
VPS51YKR020W BRO1P48582 844 aa2.38□□□□□ -2.03
VPS51YKR020W RPL4BP49626 362 aaKnown RBP2.38□□□□□ -2.03
VPS51YKR020W HSH155P49955 971 aaKnown RBP2.38□□□□□ -2.03
VPS51YKR020W RHO5P53879 331 aaKnown RBP2.38□□□□□ -2.03
VPS51YKR020W YNL134CP53912 376 aaKnown RBP2.38□□□□□ -2.03
VPS51YKR020W VPS9P54787 451 aa2.38□□□□□ -2.03
VPS51YKR020W TIM8P57744 87 aa2.38□□□□□ -2.03
VPS51YKR020W NUP116Q02630 1113 aa2.38□□□□□ -2.03
VPS51YKR020W GIP3Q03016 1276 aa2.38□□□□□ -2.03
VPS51YKR020W EBS1Q03466 884 aaKnown RBP2.38□□□□□ -2.03
VPS51YKR020W ECM7Q06200 448 aa2.38□□□□□ -2.03
VPS51YKR020W SOR2Q07786 357 aa2.38□□□□□ -2.03
VPS51YKR020W PGC1Q08959 321 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms