RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	YER186C	P40101	306 aa		3.58	□□□□□ -1.84
EBP2	YKL172W	TSA2	Q04120	196 aa		3.58	□□□□□ -1.84
EBP2	YKL172W	HMS1	Q12398	434 aa		3.58	□□□□□ -1.84
EBP2	YKL172W	NAT1	P12945	854 aa	Known RBP	3.57	□□□□□ -1.84
EBP2	YKL172W	CDC50	P25656	391 aa		3.57	□□□□□ -1.84
EBP2	YKL172W	OM14	P38325	134 aa		3.57	□□□□□ -1.84
EBP2	YKL172W	LSM12	P38828	187 aa	Known RBP	3.57	□□□□□ -1.84
EBP2	YKL172W	BAT1	P38891	393 aa	Known RBP	3.57	□□□□□ -1.84
EBP2	YKL172W	SEC27	P41811	889 aa	Known RBP	3.57	□□□□□ -1.84
EBP2	YKL172W	TRF5	P48561	642 aa	Known RBP	3.57	□□□□□ -1.84
EBP2	YKL172W	SKI8	Q02793	397 aa	Predicted RBP	3.57	□□□□□ -1.84
EBP2	YKL172W	MFG1	Q07684	458 aa		3.57	□□□□□ -1.84
EBP2	YKL172W	SPO23	P33757	523 aa		3.56	□□□□□ -1.84
EBP2	YKL172W	YSW1	P38280	609 aa		3.56	□□□□□ -1.84
EBP2	YKL172W	YHR177W	P38867	453 aa		3.56	□□□□□ -1.84
EBP2	YKL172W	SEC9	P40357	651 aa		3.56	□□□□□ -1.84
EBP2	YKL172W	MPS2	P53159	387 aa		3.56	□□□□□ -1.84
EBP2	YKL172W	CWC22	P53333	577 aa	Known RBP	3.56	□□□□□ -1.84
EBP2	YKL172W	YDL199C	Q12407	687 aa		3.56	□□□□□ -1.84
EBP2	YKL172W	SOD1	P00445	154 aa	Known RBP	3.55	□□□□□ -1.84
EBP2	YKL172W	PHO84	P25297	587 aa	Known RBP	3.55	□□□□□ -1.84
EBP2	YKL172W	PSO2	P30620	661 aa		3.55	□□□□□ -1.84
EBP2	YKL172W	FAA1	P30624	700 aa	Known RBP	3.55	□□□□□ -1.84
EBP2	YKL172W	DEP1	P31385	405 aa		3.55	□□□□□ -1.84
EBP2	YKL172W	EFB1	P32471	206 aa	Known RBP	3.55	□□□□□ -1.84
EBP2	YKL172W	UTH1	P36135	365 aa		3.55	□□□□□ -1.84
EBP2	YKL172W	REX2	P54964	269 aa	Known RBP	3.55	□□□□□ -1.84
EBP2	YKL172W	YPL107W	Q02873	248 aa		3.55	□□□□□ -1.84
EBP2	YKL172W	BSC6	Q08280	497 aa		3.55	□□□□□ -1.84
EBP2	YKL172W	PEX27	Q08580	376 aa		3.55	□□□□□ -1.84
EBP2	YKL172W	STE7	P06784	515 aa		3.54	□□□□□ -1.84
EBP2	YKL172W	IES6	P32617	166 aa		3.54	□□□□□ -1.84
EBP2	YKL172W	APE4	P38821	490 aa		3.54	□□□□□ -1.84
EBP2	YKL172W	LYS12	P40495	371 aa	Known RBP	3.54	□□□□□ -1.84
EBP2	YKL172W	RET3	P53600	189 aa		3.54	□□□□□ -1.84
EBP2	YKL172W	HIF1	Q12373	385 aa		3.54	□□□□□ -1.84
EBP2	YKL172W	FRE6	Q12473	712 aa		3.54	□□□□□ -1.84
EBP2	YKL172W	RPS18A	P0CX55	146 aa	Known RBP	3.53	□□□□□ -1.84
EBP2	YKL172W	RPS18B	P0CX56	146 aa	Predicted RBP	3.53	□□□□□ -1.84
EBP2	YKL172W	MAS2	P11914	482 aa		3.53	□□□□□ -1.84
EBP2	YKL172W	ZRC1	P20107	442 aa		3.53	□□□□□ -1.84
EBP2	YKL172W	UBA1	P22515	1024 aa	Known RBP	3.53	□□□□□ -1.84
EBP2	YKL172W	RPL16A	P26784	199 aa	Known RBP	3.53	□□□□□ -1.84
EBP2	YKL172W	MSK1	P32048	576 aa		3.53	□□□□□ -1.84
EBP2	YKL172W	SSE1	P32589	693 aa	Known RBP	3.53	□□□□□ -1.84
EBP2	YKL172W	SWI3	P32591	825 aa		3.53	□□□□□ -1.84
EBP2	YKL172W	MRP21	P38175	177 aa		3.53	□□□□□ -1.84
EBP2	YKL172W	ABM1	P47146	123 aa		3.53	□□□□□ -1.84
EBP2	YKL172W	SHS1	Q07657	551 aa		3.53	□□□□□ -1.84
EBP2	YKL172W	NBL1	Q3E7Y6	73 aa		3.53	□□□□□ -1.84
EBP2	YKL172W	COX4	P04037	155 aa		3.52	□□□□□ -1.85
EBP2	YKL172W	PRB1	P09232	635 aa		3.52	□□□□□ -1.85
EBP2	YKL172W	SCH9	P11792	824 aa	Known RBP	3.52	□□□□□ -1.85
EBP2	YKL172W	GIT1	P25346	518 aa		3.52	□□□□□ -1.85
EBP2	YKL172W	MID2	P36027	376 aa		3.52	□□□□□ -1.85
EBP2	YKL172W	GPI18	P38211	433 aa		3.52	□□□□□ -1.85
EBP2	YKL172W	SNL1	P40548	159 aa		3.52	□□□□□ -1.85
EBP2	YKL172W	RPA34	P47006	233 aa	Predicted RBP	3.52	□□□□□ -1.85
EBP2	YKL172W	YNR068C	P53754	272 aa		3.52	□□□□□ -1.85
EBP2	YKL172W	DNL4	Q08387	944 aa	Predicted RBP	3.52	□□□□□ -1.85
EBP2	YKL172W	PSK1	P31374	1356 aa		3.51	□□□□□ -1.85
EBP2	YKL172W	RDS1	P25611	832 aa		3.51	□□□□□ -1.85
EBP2	YKL172W	VAM7	P32912	316 aa		3.51	□□□□□ -1.85
EBP2	YKL172W	LCP5	P40079	357 aa	Predicted RBP	3.51	□□□□□ -1.85
EBP2	YKL172W	MKC7	P53379	596 aa		3.51	□□□□□ -1.85
EBP2	YKL172W	SPT7	P35177	1332 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	HEM4	P06174	275 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	THR4	P16120	514 aa	Known RBP	3.5	□□□□□ -1.85
EBP2	YKL172W	DAP2	P18962	818 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	LDS1	P31379	325 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	BMT2	P38278	337 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	YHR182W	P38870	785 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	TIM17	P39515	158 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	IGD1	P43598	195 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	KTR6	P54070	446 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	MSC3	Q05812	728 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	YPR078C	Q06813	372 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	SFM1	Q12314	213 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	FOL3	Q12676	427 aa	Predicted RBP	3.5	□□□□□ -1.85
EBP2	YKL172W	FSH3	Q99369	266 aa		3.5	□□□□□ -1.85
EBP2	YKL172W	DBR1	P24309	405 aa	Known RBP	3.49	□□□□□ -1.85
EBP2	YKL172W	VPH1	P32563	840 aa	Known RBP	3.49	□□□□□ -1.85
EBP2	YKL172W	YKR015C	P36111	568 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	SOL2	P37262	315 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	ADH5	P38113	351 aa	Known RBP	3.49	□□□□□ -1.85
EBP2	YKL172W	PFS1	P38872	237 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	ALD5	P40047	520 aa	Known RBP	3.49	□□□□□ -1.85
EBP2	YKL172W	CIN2	P46670	268 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	YPS5	P53057	165 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	VHT1	P53241	593 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	VHS1	Q03785	461 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	YHC1	Q05900	231 aa	Known RBP	3.49	□□□□□ -1.85
EBP2	YKL172W	GAT3	Q07928	141 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	YDL109C	Q12103	647 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	YOR338W	Q99326	363 aa		3.49	□□□□□ -1.85
EBP2	YKL172W	MAS1	P10507	462 aa		3.48	□□□□□ -1.85
EBP2	YKL172W	CHA1	P25379	360 aa	Known RBP	3.48	□□□□□ -1.85
EBP2	YKL172W	HMX1	P32339	317 aa		3.48	□□□□□ -1.85
EBP2	YKL172W	LAS1	P36146	502 aa	Predicted RBP	3.48	□□□□□ -1.85
EBP2	YKL172W	MRPS16	Q02608	121 aa		3.48	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms