RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W ATP1P07251 545 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W SGV1P23293 657 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W SKT5P34226 696 aa2.16□□□□□ -2.06
NUP100YKL068W AIM29P36154 155 aa2.16□□□□□ -2.06
NUP100YKL068W YPK3P38070 525 aa2.16□□□□□ -2.06
NUP100YKL068W CTP1P38152 299 aa2.16□□□□□ -2.06
NUP100YKL068W INM1P38710 295 aa2.16□□□□□ -2.06
NUP100YKL068W DBP8P38719 431 aa2.16□□□□□ -2.06
NUP100YKL068W MTW1P39731 289 aa2.16□□□□□ -2.06
NUP100YKL068W BUL1P48524 976 aa2.16□□□□□ -2.06
NUP100YKL068W NMA2P53204 395 aa2.16□□□□□ -2.06
NUP100YKL068W MRPL22P53881 309 aa2.16□□□□□ -2.06
NUP100YKL068W APM1Q00776 475 aaPredicted RBP2.16□□□□□ -2.06
NUP100YKL068W RPS15Q01855 142 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W SMP3Q04174 516 aa2.16□□□□□ -2.06
NUP100YKL068W EMI2Q04409 500 aaKnown RBP2.16□□□□□ -2.06
NUP100YKL068W YPR022CQ12139 1133 aa2.16□□□□□ -2.06
NUP100YKL068W IRA1P18963 3092 aa2.15□□□□□ -2.07
NUP100YKL068W COX2P00410 251 aa2.15□□□□□ -2.07
NUP100YKL068W SCEIP03882 235 aa2.15□□□□□ -2.07
NUP100YKL068W RAD7P06779 565 aa2.15□□□□□ -2.07
NUP100YKL068W YAK1P14680 807 aa2.15□□□□□ -2.07
NUP100YKL068W SEC63P14906 663 aa2.15□□□□□ -2.07
NUP100YKL068W PRP18P33411 251 aaPredicted RBP2.15□□□□□ -2.07
NUP100YKL068W YKL162CP36052 402 aa2.15□□□□□ -2.07
NUP100YKL068W RIB1P38066 345 aa2.15□□□□□ -2.07
NUP100YKL068W MIC12P38341 106 aa2.15□□□□□ -2.07
NUP100YKL068W PFS1P38872 237 aa2.15□□□□□ -2.07
NUP100YKL068W SAP1P39955 897 aaKnown RBP2.15□□□□□ -2.07
NUP100YKL068W DSN1P40568 576 aa2.15□□□□□ -2.07
NUP100YKL068W LOH1P47055 219 aa2.15□□□□□ -2.07
NUP100YKL068W MIG2P53035 382 aa2.15□□□□□ -2.07
NUP100YKL068W YGR168CP53293 376 aa2.15□□□□□ -2.07
NUP100YKL068W ARO10Q06408 635 aa2.15□□□□□ -2.07
NUP100YKL068W NSE1Q07913 336 aa2.15□□□□□ -2.07
NUP100YKL068W THP1Q08231 455 aa2.15□□□□□ -2.07
NUP100YKL068W AFT2Q08957 416 aa2.15□□□□□ -2.07
NUP100YKL068W MLH3Q12083 715 aa2.15□□□□□ -2.07
NUP100YKL068W FRE7Q12333 620 aa2.15□□□□□ -2.07
NUP100YKL068W MSK1P32048 576 aa2.15□□□□□ -2.07
NUP100YKL068W SPS19P32573 292 aaKnown RBP2.15□□□□□ -2.07
NUP100YKL068W CYS4P32582 507 aaKnown RBP2.15□□□□□ -2.07
NUP100YKL068W LIP5P32875 414 aa2.15□□□□□ -2.07
NUP100YKL068W DOA1P36037 715 aa2.15□□□□□ -2.07
NUP100YKL068W YPT10P38146 199 aa2.15□□□□□ -2.07
NUP100YKL068W YHR122WP38829 231 aa2.15□□□□□ -2.07
NUP100YKL068W GAT2P40209 560 aa2.15□□□□□ -2.07
NUP100YKL068W PAC11P40960 533 aa2.15□□□□□ -2.07
NUP100YKL068W PHO86P46956 311 aa2.15□□□□□ -2.07
NUP100YKL068W YPT11P48559 417 aa2.15□□□□□ -2.07
NUP100YKL068W PMT5P52867 743 aa2.15□□□□□ -2.07
NUP100YKL068W ERG26P53199 349 aaKnown RBP2.15□□□□□ -2.07
NUP100YKL068W MTQ1P53944 314 aa2.15□□□□□ -2.07
NUP100YKL068W DIA1P54005 336 aa2.15□□□□□ -2.07
NUP100YKL068W IZH1Q03419 316 aa2.15□□□□□ -2.07
NUP100YKL068W YMR209CQ03648 457 aa2.15□□□□□ -2.07
NUP100YKL068W RRI1Q12468 440 aa2.15□□□□□ -2.07
NUP100YKL068W FSH3Q99369 266 aa2.15□□□□□ -2.07
NUP100YKL068W PEP4P07267 405 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W TCP1P12612 559 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W FRS2P15625 503 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W CKI1P20485 582 aa2.14□□□□□ -2.07
NUP100YKL068W UTR1P21373 530 aa2.14□□□□□ -2.07
NUP100YKL068W GAS1P22146 559 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W RPS5P26783 225 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W ADE1P27616 306 aa2.14□□□□□ -2.07
NUP100YKL068W YKR073CP36153 106 aa2.14□□□□□ -2.07
NUP100YKL068W RTC3P38804 111 aaPredicted RBP2.14□□□□□ -2.07
NUP100YKL068W YER079WP40052 210 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W UTP25P40498 721 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W ERG10P41338 398 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W YDL186WP48568 277 aa2.14□□□□□ -2.07
NUP100YKL068W MUP1P50276 574 aa2.14□□□□□ -2.07
NUP100YKL068W TRM112P53738 135 aaPredicted RBP2.14□□□□□ -2.07
NUP100YKL068W DUG3P53871 357 aa2.14□□□□□ -2.07
NUP100YKL068W YNL181WP53878 407 aa2.14□□□□□ -2.07
NUP100YKL068W YLR283WQ05867 314 aa2.14□□□□□ -2.07
NUP100YKL068W YDL086WQ07505 273 aa2.14□□□□□ -2.07
NUP100YKL068W SRO7Q12038 1033 aa2.14□□□□□ -2.07
NUP100YKL068W USV1Q12132 391 aa2.14□□□□□ -2.07
NUP100YKL068W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
NUP100YKL068W LCB4Q12246 624 aa2.14□□□□□ -2.07
NUP100YKL068W RNH203Q12338 110 aa2.14□□□□□ -2.07
NUP100YKL068W THP2O13539 261 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W CHO1P08456 276 aa2.14□□□□□ -2.07
NUP100YKL068W KGD2P19262 463 aaPredicted RBP2.14□□□□□ -2.07
NUP100YKL068W KAR4P25583 335 aa2.14□□□□□ -2.07
NUP100YKL068W PEX3P28795 441 aa2.14□□□□□ -2.07
NUP100YKL068W ACH1P32316 526 aa2.14□□□□□ -2.07
NUP100YKL068W PRP21P32524 280 aaPredicted RBP2.14□□□□□ -2.07
NUP100YKL068W HIS7P33734 552 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W SPT10P35208 640 aa2.14□□□□□ -2.07
NUP100YKL068W TCM62P38228 572 aaKnown RBP2.14□□□□□ -2.07
NUP100YKL068W SAS2P40963 338 aa2.14□□□□□ -2.07
NUP100YKL068W YGR210CP42942 411 aa2.14□□□□□ -2.07
NUP100YKL068W YAR1P46683 200 aa2.14□□□□□ -2.07
NUP100YKL068W GLG2P47011 380 aa2.14□□□□□ -2.07
NUP100YKL068W IBA57P47158 497 aa2.14□□□□□ -2.07
NUP100YKL068W PRM15Q03262 622 aa2.14□□□□□ -2.07
NUP100YKL068W YDR222WQ04925 415 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms