RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W YPR1Q12458 312 aa3.31□□□□□ -1.88
CTM1YHR109W DET1Q99288 334 aaKnown RBP3.31□□□□□ -1.88
CTM1YHR109W SSA3P09435 649 aaKnown RBP3.3□□□□□ -1.88
CTM1YHR109W MTF1P14908 341 aaKnown RBP3.3□□□□□ -1.88
CTM1YHR109W FAR1P21268 830 aa3.3□□□□□ -1.88
CTM1YHR109W PTP1P25044 335 aa3.3□□□□□ -1.88
CTM1YHR109W YCR043CP25361 127 aa3.3□□□□□ -1.88
CTM1YHR109W SPR1P32603 445 aa3.3□□□□□ -1.88
CTM1YHR109W YEF1P32622 495 aa3.3□□□□□ -1.88
CTM1YHR109W MNS1P32906 549 aa3.3□□□□□ -1.88
CTM1YHR109W VAM7P32912 316 aa3.3□□□□□ -1.88
CTM1YHR109W YKL162CP36052 402 aa3.3□□□□□ -1.88
CTM1YHR109W PMU1P36069 295 aa3.3□□□□□ -1.88
CTM1YHR109W CUE2P36075 443 aaKnown RBP3.3□□□□□ -1.88
CTM1YHR109W YHK8P38776 514 aa3.3□□□□□ -1.88
CTM1YHR109W MET30P39014 640 aa3.3□□□□□ -1.88
CTM1YHR109W CCT4P39078 528 aaKnown RBP3.3□□□□□ -1.88
CTM1YHR109W BTT1P40314 149 aaPredicted RBP3.3□□□□□ -1.88
CTM1YHR109W SEC9P40357 651 aa3.3□□□□□ -1.88
CTM1YHR109W YIL169CP40442 995 aa3.3□□□□□ -1.88
CTM1YHR109W RPR2P40571 144 aa3.3□□□□□ -1.88
CTM1YHR109W DIM1P41819 318 aaKnown RBP3.3□□□□□ -1.88
CTM1YHR109W NUP84P52891 726 aa3.3□□□□□ -1.88
CTM1YHR109W APC4Q04601 652 aa3.3□□□□□ -1.88
CTM1YHR109W FMP42Q04991 504 aa3.3□□□□□ -1.88
CTM1YHR109W SHS1Q07657 551 aa3.3□□□□□ -1.88
CTM1YHR109W YOL107WQ12239 342 aa3.3□□□□□ -1.88
CTM1YHR109W FMP16Q12497 93 aa3.3□□□□□ -1.88
CTM1YHR109W RPL20AP0CX23 172 aaKnown RBP3.3□□□□□ -1.88
CTM1YHR109W RPL20BP0CX24 172 aaPredicted RBP3.3□□□□□ -1.88
CTM1YHR109W CSM1P25651 190 aa3.3□□□□□ -1.88
CTM1YHR109W ECT1P33412 323 aa3.3□□□□□ -1.88
CTM1YHR109W TIR2P33890 251 aa3.3□□□□□ -1.88
CTM1YHR109W MTC6P38849 526 aa3.3□□□□□ -1.88
CTM1YHR109W UTP25P40498 721 aaKnown RBP3.3□□□□□ -1.88
CTM1YHR109W RTT101P47050 842 aa3.3□□□□□ -1.88
CTM1YHR109W SSN8P47821 323 aa3.3□□□□□ -1.88
CTM1YHR109W SCW4P53334 386 aaKnown RBP3.3□□□□□ -1.88
CTM1YHR109W WSC2P53832 503 aa3.3□□□□□ -1.88
CTM1YHR109W SGT2Q12118 346 aaKnown RBP3.3□□□□□ -1.88
CTM1YHR109W GPI12P23797 304 aa3.29□□□□□ -1.88
CTM1YHR109W ICL1P28240 557 aaPredicted RBP3.29□□□□□ -1.88
CTM1YHR109W RPC25P35718 212 aa3.29□□□□□ -1.88
CTM1YHR109W YND1P40009 630 aa3.29□□□□□ -1.88
CTM1YHR109W YMR134WP40207 237 aa3.29□□□□□ -1.88
CTM1YHR109W PCI8P40512 444 aa3.29□□□□□ -1.88
CTM1YHR109W CDC40P40968 455 aaPredicted RBP3.29□□□□□ -1.88
CTM1YHR109W LST7P53237 242 aa3.29□□□□□ -1.88
CTM1YHR109W HER2Q03557 464 aa3.29□□□□□ -1.88
CTM1YHR109W RAX1Q08760 435 aa3.29□□□□□ -1.88
CTM1YHR109W THP3Q12049 470 aaKnown RBP3.29□□□□□ -1.88
CTM1YHR109W LDB17Q12342 491 aa3.29□□□□□ -1.88
CTM1YHR109W RPL15AP05748 204 aaKnown RBP3.28□□□□□ -1.88
CTM1YHR109W MRPL8P22353 238 aa3.28□□□□□ -1.88
CTM1YHR109W VMA5P31412 392 aaKnown RBP3.28□□□□□ -1.88
CTM1YHR109W ASK1P35734 292 aa3.28□□□□□ -1.88
CTM1YHR109W NAT2P37293 288 aa3.28□□□□□ -1.88
CTM1YHR109W IST2P38250 946 aa3.28□□□□□ -1.88
CTM1YHR109W JLP2P40206 208 aa3.28□□□□□ -1.88
CTM1YHR109W TES1P41903 349 aaKnown RBP3.28□□□□□ -1.88
CTM1YHR109W TRM112P53738 135 aaPredicted RBP3.28□□□□□ -1.88
CTM1YHR109W CAF40P53829 373 aa3.28□□□□□ -1.88
CTM1YHR109W YMR181CQ03231 154 aa3.28□□□□□ -1.88
CTM1YHR109W SET6Q12529 373 aa3.28□□□□□ -1.88
CTM1YHR109W PAB1P04147 577 aaKnown RBP RIP-Chip data3.28□□□□□ -1.89not detected
CTM1YHR109W ARF2P19146 181 aaKnown RBP3.28□□□□□ -1.89
CTM1YHR109W SEC1P30619 724 aaKnown RBP3.28□□□□□ -1.89
CTM1YHR109W ATO2P32907 282 aa3.28□□□□□ -1.89
CTM1YHR109W YMR262WP38430 313 aa3.28□□□□□ -1.89
CTM1YHR109W SEC27P41811 889 aaKnown RBP3.28□□□□□ -1.89
CTM1YHR109W YCH1P42937 148 aa3.28□□□□□ -1.89
CTM1YHR109W PXR1P53335 271 aaPredicted RBP3.28□□□□□ -1.89
CTM1YHR109W ATC1Q04005 294 aa3.28□□□□□ -1.89
CTM1YHR109W SAM4Q08985 325 aaKnown RBP3.28□□□□□ -1.89
CTM1YHR109W RRP12Q12754 1228 aaKnown RBP3.28□□□□□ -1.89
CTM1YHR109W RAD7P06779 565 aa3.27□□□□□ -1.89
CTM1YHR109W MSS116P15424 664 aaKnown RBP3.27□□□□□ -1.89
CTM1YHR109W CDC42P19073 191 aa3.27□□□□□ -1.89
CTM1YHR109W PUT3P25502 979 aaPredicted RBP3.27□□□□□ -1.89
CTM1YHR109W MKK1P32490 508 aa3.27□□□□□ -1.89
CTM1YHR109W MIX23P38162 196 aa3.27□□□□□ -1.89
CTM1YHR109W PEX32P38292 413 aa3.27□□□□□ -1.89
CTM1YHR109W SBE22P38814 852 aa3.27□□□□□ -1.89
CTM1YHR109W RBG1P39729 369 aa3.27□□□□□ -1.89
CTM1YHR109W CTK3P46963 296 aaPredicted RBP3.27□□□□□ -1.89
CTM1YHR109W LOH1P47055 219 aa3.27□□□□□ -1.89
CTM1YHR109W YJR030CP47101 745 aa3.27□□□□□ -1.89
CTM1YHR109W LSB1P53281 241 aa3.27□□□□□ -1.89
CTM1YHR109W YNL260CP53846 198 aa3.27□□□□□ -1.89
CTM1YHR109W RVB1Q03940 463 aaKnown RBP3.27□□□□□ -1.89
CTM1YHR109W ARV1Q06541 321 aa3.27□□□□□ -1.89
CTM1YHR109W PBP4Q07362 185 aaKnown RBP3.27□□□□□ -1.89
CTM1YHR109W YRM1Q12340 786 aa3.27□□□□□ -1.89
CTM1YHR109W MEX67Q99257 599 aaKnown RBP3.27□□□□□ -1.89
CTM1YHR109W CPR1P14832 162 aaKnown RBP3.26□□□□□ -1.89
CTM1YHR109W RNA14P25298 677 aaKnown RBP3.26□□□□□ -1.89
CTM1YHR109W PHA2P32452 334 aa3.26□□□□□ -1.89
CTM1YHR109W DPH5P32469 300 aaPredicted RBP3.26□□□□□ -1.89
CTM1YHR109W MUD1P32605 298 aaKnown RBP3.26□□□□□ -1.89
CTM1YHR109W DTR1P38125 572 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 100.8 ms