RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	YLR281C	Q05863	155 aa		3.44	□□□□□ -1.86
YPT35	YHR105W	TIM18	Q08749	192 aa		3.44	□□□□□ -1.86
YPT35	YHR105W	DAP1	Q12091	152 aa		3.44	□□□□□ -1.86
YPT35	YHR105W	JIP3	O13555	125 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	TEF1	P02994	458 aa	Known RBP	3.43	□□□□□ -1.86
YPT35	YHR105W	RPL20A	P0CX23	172 aa	Known RBP	3.43	□□□□□ -1.86
YPT35	YHR105W	RPL20B	P0CX24	172 aa	Predicted RBP	3.43	□□□□□ -1.86
YPT35	YHR105W	MTF1	P14908	341 aa	Known RBP	3.43	□□□□□ -1.86
YPT35	YHR105W	SRB2	P34162	210 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	BZZ1	P38822	633 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	LIN1	P38852	340 aa	Predicted RBP	3.43	□□□□□ -1.86
YPT35	YHR105W	YIL089W	P40500	205 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	CTK3	P46963	296 aa	Predicted RBP	3.43	□□□□□ -1.86
YPT35	YHR105W	RPA34	P47006	233 aa	Predicted RBP	3.43	□□□□□ -1.86
YPT35	YHR105W	STE24	P47154	453 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	BRO1	P48582	844 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	LSC1	P53598	329 aa	Known RBP	3.43	□□□□□ -1.86
YPT35	YHR105W	COS1	P53822	381 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	HXT11	P54862	567 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	MMT1	Q03218	510 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	ABZ2	Q03266	374 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	ERP1	Q05359	219 aa	Known RBP	3.43	□□□□□ -1.86
YPT35	YHR105W	NBL1	Q3E7Y6	73 aa		3.43	□□□□□ -1.86
YPT35	YHR105W	ARG4	P04076	463 aa	Predicted RBP	3.42	□□□□□ -1.86
YPT35	YHR105W	SEC14	P24280	304 aa	Known RBP	3.42	□□□□□ -1.86
YPT35	YHR105W	RAD51	P25454	400 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	YBR139W	P38109	508 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	RFT1	P38206	574 aa	Predicted RBP	3.42	□□□□□ -1.86
YPT35	YHR105W	KAP104	P38217	918 aa	Known RBP	3.42	□□□□□ -1.86
YPT35	YHR105W	RPH1	P39956	796 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	OST1	P41543	476 aa	Known RBP	3.42	□□□□□ -1.86
YPT35	YHR105W	ILM1	P47155	203 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	AZR1	P50080	613 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	COS10	P52924	374 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	WSC2	P53832	503 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	ALF1	P53904	254 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	SMA2	Q04658	369 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	STE23	Q06010	1027 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	ASA1	Q06822	443 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	AIM45	Q12480	344 aa	Known RBP	3.42	□□□□□ -1.86
YPT35	YHR105W	RAD61	Q99359	647 aa		3.42	□□□□□ -1.86
YPT35	YHR105W	RPL22A	P05749	121 aa	Known RBP	3.41	□□□□□ -1.86
YPT35	YHR105W	RAD1	P06777	1100 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	MATALPHA2	P0CY08	210 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	HMLALPHA2	P0CY09	210 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	ATR1	P13090	542 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	PHO13	P19881	312 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	MRPS28	P21771	286 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	MMF1	P40185	145 aa	Known RBP	3.41	□□□□□ -1.86
YPT35	YHR105W	LAM5	P43560	674 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	ABM1	P47146	123 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	PXR1	P53335	271 aa	Predicted RBP	3.41	□□□□□ -1.86
YPT35	YHR105W	RRN9	P53437	365 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	SPO19	Q03029	223 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	MGR3	Q04472	501 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	YPL199C	Q08954	240 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	SET6	Q12529	373 aa		3.41	□□□□□ -1.86
YPT35	YHR105W	FKS3	Q04952	1785 aa		3.4	□□□□□ -1.86
YPT35	YHR105W	CDC8	P00572	216 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	RPS16A	P0CX51	143 aa	Known RBP	3.4	□□□□□ -1.87
YPT35	YHR105W	RPS16B	P0CX52	143 aa	Known RBP	3.4	□□□□□ -1.87
YPT35	YHR105W	SLY1	P22213	666 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	RAD5	P32849	1169 aa	Predicted RBP	3.4	□□□□□ -1.87
YPT35	YHR105W	KKQ8	P36004	724 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	YBR056W	P38081	501 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	MIX23	P38162	196 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	FAA2	P39518	744 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	SEC9	P40357	651 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	MEP2	P41948	499 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	MIC19	P43594	170 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	YJR079W	P47126	109 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	PRM1	P53835	661 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	VAC14	Q06708	880 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	AAD15	Q08361	143 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	PEX27	Q08580	376 aa		3.4	□□□□□ -1.87
YPT35	YHR105W	THP3	Q12049	470 aa	Known RBP	3.4	□□□□□ -1.87
YPT35	YHR105W	RRP12	Q12754	1228 aa	Known RBP	3.4	□□□□□ -1.87
YPT35	YHR105W	SSC1	P0CS90	654 aa	Known RBP	3.39	□□□□□ -1.87
YPT35	YHR105W	MCK1	P21965	375 aa	Known RBP	3.39	□□□□□ -1.87
YPT35	YHR105W	DBR1	P24309	405 aa	Known RBP	3.39	□□□□□ -1.87
YPT35	YHR105W	SLM5	P25345	492 aa	Known RBP	3.39	□□□□□ -1.87
YPT35	YHR105W	AGA1	P32323	725 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	DPH5	P32469	300 aa	Predicted RBP	3.39	□□□□□ -1.87
YPT35	YHR105W	SRB4	P32569	687 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	not detected
YPT35	YHR105W	YDR089W	P38966	869 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	YJL070C	P40361	888 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	TOS3	P43637	560 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	YDL186W	P48568	277 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	CAF40	P53829	373 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	AIM33	Q04516	312 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	ERV41	Q04651	352 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	SFH1	Q06168	426 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	CMS1	Q07897	291 aa	Known RBP	3.39	□□□□□ -1.87
YPT35	YHR105W	MUM3	Q08750	479 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	RTC5	Q12108	567 aa	Known RBP	3.39	□□□□□ -1.87
YPT35	YHR105W	MDY2	Q12285	212 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	NCA2	Q12374	616 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	TY4B-H	P0C2J7	1802 aa		3.39	□□□□□ -1.87
YPT35	YHR105W	TY4B-J	P47024	1803 aa		3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms