RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W YHC1Q05900 231 aaKnown RBP1.94□□□□□ -2.1
RPF1YHR088W MCT1Q12283 360 aa1.94□□□□□ -2.1
RPF1YHR088W CDC31P06704 161 aaKnown RBP1.93□□□□□ -2.1
RPF1YHR088W FUS3P16892 353 aaKnown RBP1.93□□□□□ -2.1
RPF1YHR088W SMP1P38128 452 aa1.93□□□□□ -2.1
RPF1YHR088W WSC4P38739 605 aa1.93□□□□□ -2.1
RPF1YHR088W INP2Q03824 705 aa1.93□□□□□ -2.1
RPF1YHR088W ROY1Q04847 553 aa1.93□□□□□ -2.1
RPF1YHR088W MMR1Q06324 491 aa1.93□□□□□ -2.1
RPF1YHR088W SRO7Q12038 1033 aa1.93□□□□□ -2.1
RPF1YHR088W SPS19P32573 292 aaKnown RBP1.92□□□□□ -2.1
RPF1YHR088W RAD23P32628 398 aaKnown RBP1.92□□□□□ -2.1
RPF1YHR088W ASC1P38011 319 aaKnown RBP1.92□□□□□ -2.1
RPF1YHR088W GPX2P38143 162 aa1.92□□□□□ -2.1
RPF1YHR088W SLM4P38247 162 aa1.92□□□□□ -2.1
RPF1YHR088W LSM5P40089 93 aaKnown RBP1.92□□□□□ -2.1
RPF1YHR088W VHS2P40463 436 aa1.92□□□□□ -2.1
RPF1YHR088W GPD2P41911 440 aaKnown RBP1.92□□□□□ -2.1
RPF1YHR088W COS4P43542 379 aa1.92□□□□□ -2.1
RPF1YHR088W STE24P47154 453 aa1.92□□□□□ -2.1
RPF1YHR088W ASN2P49090 572 aaKnown RBP1.92□□□□□ -2.1
RPF1YHR088W CWC22P53333 577 aaKnown RBP1.92□□□□□ -2.1
RPF1YHR088W RNH201P53942 307 aa1.92□□□□□ -2.1
RPF1YHR088W YLR287CQ05881 355 aa1.92□□□□□ -2.1
RPF1YHR088W FAR10Q06001 478 aa1.92□□□□□ -2.1
RPF1YHR088W YOP1Q12402 180 aa1.92□□□□□ -2.1
RPF1YHR088W AUS1Q08409 1394 aa1.92□□□□□ -2.1
RPF1YHR088W TIR2P33890 251 aa1.91□□□□□ -2.1
RPF1YHR088W STN1P38960 494 aa1.91□□□□□ -2.1
RPF1YHR088W CAK1P43568 368 aaPredicted RBP1.91□□□□□ -2.1
RPF1YHR088W AFI1Q99222 893 aa1.91□□□□□ -2.1
RPF1YHR088W CDC21P06785 304 aa1.9□□□□□ -2.11
RPF1YHR088W MSP1P28737 362 aa1.9□□□□□ -2.11
RPF1YHR088W UTR5P32630 166 aa1.9□□□□□ -2.11
RPF1YHR088W YGP1P38616 354 aaKnown RBP1.9□□□□□ -2.11
RPF1YHR088W INM1P38710 295 aa1.9□□□□□ -2.11
RPF1YHR088W GPI16P38875 610 aa1.9□□□□□ -2.11
RPF1YHR088W STB1P42845 420 aa1.9□□□□□ -2.11
RPF1YHR088W YOR338WQ99326 363 aa1.9□□□□□ -2.11
RPF1YHR088W URA7P28274 579 aaKnown RBP1.89□□□□□ -2.11
RPF1YHR088W CBF5P33322 483 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
RPF1YHR088W HEL1P36113 551 aa1.89□□□□□ -2.11
RPF1YHR088W GEP4P38812 185 aa1.89□□□□□ -2.11
RPF1YHR088W RRT13P40042 185 aa1.89□□□□□ -2.11
RPF1YHR088W ATM1P40416 690 aa1.89□□□□□ -2.11
RPF1YHR088W SRB7P47822 140 aa1.89□□□□□ -2.11
RPF1YHR088W BNI5P53890 448 aaKnown RBP1.89□□□□□ -2.11
RPF1YHR088W YMR155WQ03795 547 aa1.89□□□□□ -2.11
RPF1YHR088W YDR341CQ05506 607 aaKnown RBP1.89□□□□□ -2.11
RPF1YHR088W NSE1Q07913 336 aa1.89□□□□□ -2.11
RPF1YHR088W ARF1P11076 181 aaKnown RBP1.88□□□□□ -2.11
RPF1YHR088W UNG1P12887 359 aa1.88□□□□□ -2.11
RPF1YHR088W ARO3P14843 370 aaKnown RBP1.88□□□□□ -2.11
RPF1YHR088W ADK2P26364 225 aa1.88□□□□□ -2.11
RPF1YHR088W COS9P36034 407 aa1.88□□□□□ -2.11
RPF1YHR088W YBR241CP38142 488 aa1.88□□□□□ -2.11
RPF1YHR088W RRN9P53437 365 aa1.88□□□□□ -2.11
RPF1YHR088W YDR131CQ03899 556 aa1.88□□□□□ -2.11
RPF1YHR088W FSH2Q05015 223 aa1.88□□□□□ -2.11
RPF1YHR088W ECM7Q06200 448 aa1.88□□□□□ -2.11
RPF1YHR088W STE2D6VTK4 431 aa1.87□□□□□ -2.11
RPF1YHR088W TPK3P05986 398 aa1.87□□□□□ -2.11
RPF1YHR088W RPN12P32496 274 aa1.87□□□□□ -2.11
RPF1YHR088W ANP1P32629 500 aa1.87□□□□□ -2.11
RPF1YHR088W SKG6P32900 734 aaPredicted RBP1.87□□□□□ -2.11
RPF1YHR088W DOA1P36037 715 aa1.87□□□□□ -2.11
RPF1YHR088W SHE1P38200 338 aa1.87□□□□□ -2.11
RPF1YHR088W ZTA1P38230 334 aaKnown RBP1.87□□□□□ -2.11
RPF1YHR088W RBG1P39729 369 aa1.87□□□□□ -2.11
RPF1YHR088W SCC4P40090 624 aa1.87□□□□□ -2.11
RPF1YHR088W YIL059CP40520 121 aa1.87□□□□□ -2.11
RPF1YHR088W UFE1P41834 346 aa1.87□□□□□ -2.11
RPF1YHR088W SED5Q01590 340 aa1.87□□□□□ -2.11
RPF1YHR088W HEM4P06174 275 aa1.86□□□□□ -2.11
RPF1YHR088W CHA1P25379 360 aaKnown RBP1.86□□□□□ -2.11
RPF1YHR088W DBF4P32325 704 aa1.86□□□□□ -2.11
RPF1YHR088W CIN2P46670 268 aa1.86□□□□□ -2.11
RPF1YHR088W CTK3P46963 296 aaPredicted RBP1.86□□□□□ -2.11
RPF1YHR088W TOS2P50078 622 aa1.86□□□□□ -2.11
RPF1YHR088W YGR015CP53208 328 aa1.86□□□□□ -2.11
RPF1YHR088W RMI1Q02685 241 aa1.86□□□□□ -2.11
RPF1YHR088W ERB1Q04660 807 aaKnown RBP1.86□□□□□ -2.11
RPF1YHR088W ASA1Q06822 443 aa1.86□□□□□ -2.11
RPF1YHR088W AEP3Q12089 606 aa1.86□□□□□ -2.11
RPF1YHR088W SCH9P11792 824 aaKnown RBP1.85□□□□□ -2.11
RPF1YHR088W CPR2P23285 205 aa1.85□□□□□ -2.11
RPF1YHR088W SLM5P25345 492 aaKnown RBP1.85□□□□□ -2.11
RPF1YHR088W RPL16AP26784 199 aaKnown RBP1.85□□□□□ -2.11
RPF1YHR088W TOA2P32774 122 aa1.85□□□□□ -2.11
RPF1YHR088W BYE1P36106 594 aa1.85□□□□□ -2.11
RPF1YHR088W DBP7P36120 742 aaKnown RBP1.85□□□□□ -2.11
RPF1YHR088W SER3P40054 469 aa1.85□□□□□ -2.11
RPF1YHR088W BIO3P50277 480 aa1.85□□□□□ -2.11
RPF1YHR088W MDM1Q01846 1127 aa1.85□□□□□ -2.11
RPF1YHR088W APC4Q04601 652 aa1.85□□□□□ -2.11
RPF1YHR088W LDS2Q08218 356 aa1.85□□□□□ -2.11
RPF1YHR088W BUD21Q08492 214 aaPredicted RBP1.85□□□□□ -2.11
RPF1YHR088W ATP16Q12165 160 aa1.85□□□□□ -2.11
RPF1YHR088W RNH203Q12338 110 aa1.85□□□□□ -2.11
RPF1YHR088W RPL12AP0CX53 165 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms