RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A FCY22Q12119 530 aa2.44□□□□□ -2.02
YGR109W-AYGR109W-A YNL208WP40159 199 aaKnown RBP2.43□□□□□ -2.02
YGR109W-AYGR109W-A SEC28P40509 296 aaKnown RBP2.43□□□□□ -2.02
YGR109W-AYGR109W-A ASN2P49090 572 aaKnown RBP2.43□□□□□ -2.02
YGR109W-AYGR109W-A IPK1Q06667 281 aa2.43□□□□□ -2.02
YGR109W-AYGR109W-A RNA1P11745 407 aaKnown RBP2.42□□□□□ -2.02
YGR109W-AYGR109W-A ZRC1P20107 442 aa2.42□□□□□ -2.02
YGR109W-AYGR109W-A RAD5P32849 1169 aaPredicted RBP2.42□□□□□ -2.02
YGR109W-AYGR109W-A KAP104P38217 918 aaKnown RBP2.42□□□□□ -2.02
YGR109W-AYGR109W-A PFS1P38872 237 aa2.42□□□□□ -2.02
YGR109W-AYGR109W-A JEM1P40358 645 aa2.42□□□□□ -2.02
YGR109W-AYGR109W-A YGL262WP53054 175 aa2.42□□□□□ -2.02
YGR109W-AYGR109W-A FLC3P53121 802 aa2.42□□□□□ -2.02
YGR109W-AYGR109W-A TRM112P53738 135 aaPredicted RBP2.42□□□□□ -2.02
YGR109W-AYGR109W-A ALF1P53904 254 aa2.42□□□□□ -2.02
YGR109W-AYGR109W-A TPS1Q00764 495 aaKnown RBP2.42□□□□□ -2.02
YGR109W-AYGR109W-A SKI8Q02793 397 aaPredicted RBP2.42□□□□□ -2.02
YGR109W-AYGR109W-A PRM6Q04705 352 aa2.42□□□□□ -2.02
YGR109W-AYGR109W-A YHC1Q05900 231 aaKnown RBP2.42□□□□□ -2.02
YGR109W-AYGR109W-A YDL199CQ12407 687 aa2.42□□□□□ -2.02
YGR109W-AYGR109W-A CCH1P50077 2039 aa2.42□□□□□ -2.02
YGR109W-AYGR109W-A DAP2P18962 818 aa2.41□□□□□ -2.02
YGR109W-AYGR109W-A FUN26P31381 517 aa2.41□□□□□ -2.02
YGR109W-AYGR109W-A DPH2P32461 534 aa2.41□□□□□ -2.02
YGR109W-AYGR109W-A HEM14P40012 539 aa2.41□□□□□ -2.02
YGR109W-AYGR109W-A EPL1P43572 832 aa2.41□□□□□ -2.02
YGR109W-AYGR109W-A KEG1P43614 200 aa2.41□□□□□ -2.02
YGR109W-AYGR109W-A MLC1P53141 149 aa2.41□□□□□ -2.02
YGR109W-AYGR109W-A GAT3Q07928 141 aa2.41□□□□□ -2.02
YGR109W-AYGR109W-A MCT1Q12283 360 aa2.41□□□□□ -2.02
YGR109W-AYGR109W-A FOL3Q12676 427 aaPredicted RBP2.41□□□□□ -2.02
YGR109W-AYGR109W-A CHA1P25379 360 aaKnown RBP2.4□□□□□ -2.03
YGR109W-AYGR109W-A SPO23P33757 523 aa2.4□□□□□ -2.03
YGR109W-AYGR109W-A MRPL27P36526 146 aaPredicted RBP2.4□□□□□ -2.03
YGR109W-AYGR109W-A RXT2P38255 430 aa2.4□□□□□ -2.03
YGR109W-AYGR109W-A YSW1P38280 609 aa2.4□□□□□ -2.03
YGR109W-AYGR109W-A SEC27P41811 889 aaKnown RBP2.4□□□□□ -2.03
YGR109W-AYGR109W-A IGD1P43598 195 aa2.4□□□□□ -2.03
YGR109W-AYGR109W-A CTK3P46963 296 aaPredicted RBP2.4□□□□□ -2.03
YGR109W-AYGR109W-A KTR6P54070 446 aa2.4□□□□□ -2.03
YGR109W-AYGR109W-A ERO1Q03103 563 aa2.4□□□□□ -2.03
YGR109W-AYGR109W-A YDL114WQ07530 308 aa2.4□□□□□ -2.03
YGR109W-AYGR109W-A AAD15Q08361 143 aa2.4□□□□□ -2.03
YGR109W-AYGR109W-A BMT2P38278 337 aa2.39□□□□□ -2.03
YGR109W-AYGR109W-A CIN2P46670 268 aa2.39□□□□□ -2.03
YGR109W-AYGR109W-A MCH1Q07376 486 aa2.39□□□□□ -2.03
YGR109W-AYGR109W-A HTZ1Q12692 134 aaKnown RBP2.39□□□□□ -2.03
YGR109W-AYGR109W-A SCH9P11792 824 aaKnown RBP2.38□□□□□ -2.03
YGR109W-AYGR109W-A DEP1P31385 405 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A PUP2P32379 260 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A WSS1P38838 269 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A SEC9P40357 651 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A ATP22P50273 684 aaPredicted RBP2.38□□□□□ -2.03
YGR109W-AYGR109W-A REX2P54964 269 aaKnown RBP2.38□□□□□ -2.03
YGR109W-AYGR109W-A PIN3Q06449 215 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A YDR061WQ12298 539 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A PRM7Q12459 698 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A FRE6Q12473 712 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A PCL9Q12477 304 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A SRN2Q99176 213 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A YOR338WQ99326 363 aa2.38□□□□□ -2.03
YGR109W-AYGR109W-A RPS18AP0CX55 146 aaKnown RBP2.37□□□□□ -2.03
YGR109W-AYGR109W-A RPS18BP0CX56 146 aaPredicted RBP2.37□□□□□ -2.03
YGR109W-AYGR109W-A ECT1P33412 323 aa2.37□□□□□ -2.03
YGR109W-AYGR109W-A YPR078CQ06813 372 aa2.37□□□□□ -2.03
YGR109W-AYGR109W-A YFH1Q07540 174 aa2.37□□□□□ -2.03
YGR109W-AYGR109W-A YOR012WQ12351 137 aa2.37□□□□□ -2.03
YGR109W-AYGR109W-A RAX2Q12465 1220 aa2.37□□□□□ -2.03
YGR109W-AYGR109W-A MEX67Q99257 599 aaKnown RBP2.37□□□□□ -2.03
YGR109W-AYGR109W-A PSO2P30620 661 aa2.36□□□□□ -2.03
YGR109W-AYGR109W-A FAA1P30624 700 aaKnown RBP2.36□□□□□ -2.03
YGR109W-AYGR109W-A ZUO1P32527 433 aaKnown RBP2.36□□□□□ -2.03
YGR109W-AYGR109W-A ADH5P38113 351 aaKnown RBP2.36□□□□□ -2.03
YGR109W-AYGR109W-A DTR1P38125 572 aa2.36□□□□□ -2.03
YGR109W-AYGR109W-A YFL012WP43580 148 aa2.36□□□□□ -2.03
YGR109W-AYGR109W-A SEH1P53011 349 aaKnown RBP2.36□□□□□ -2.03
YGR109W-AYGR109W-A YPL107WQ02873 248 aa2.36□□□□□ -2.03
YGR109W-AYGR109W-A MSC3Q05812 728 aa2.36□□□□□ -2.03
YGR109W-AYGR109W-A YLH47Q06493 454 aa2.36□□□□□ -2.03
YGR109W-AYGR109W-A YOR376WQ08900 122 aa2.36□□□□□ -2.03
YGR109W-AYGR109W-A YPS3Q12303 508 aa2.36□□□□□ -2.03
YGR109W-AYGR109W-A BI3Q9ZZW7 517 aa2.36□□□□□ -2.03
YGR109W-AYGR109W-A RPL6BP05739 176 aaKnown RBP2.35□□□□□ -2.03
YGR109W-AYGR109W-A CMK2P22517 447 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A DBR1P24309 405 aaKnown RBP2.35□□□□□ -2.03
YGR109W-AYGR109W-A GIT1P25346 518 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A ANP1P32629 500 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A PTK1P36002 662 aaPredicted RBP2.35□□□□□ -2.03
YGR109W-AYGR109W-A WSC4P38739 605 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A TRF5P48561 642 aaKnown RBP2.35□□□□□ -2.03
YGR109W-AYGR109W-A RET3P53600 189 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A YNR068CP53754 272 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A VAC7P53950 1165 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A PRP38Q00723 242 aaPredicted RBP2.35□□□□□ -2.03
YGR109W-AYGR109W-A RPL6AQ02326 176 aaKnown RBP2.35□□□□□ -2.03
YGR109W-AYGR109W-A ENT5Q03769 411 aaKnown RBP2.35□□□□□ -2.03
YGR109W-AYGR109W-A AIM33Q04516 312 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A PEX27Q08580 376 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A SFG1Q12507 346 aa2.35□□□□□ -2.03
YGR109W-AYGR109W-A DET1Q99288 334 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms