RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C ALF1P53904 254 aa1.9□□□□□ -2.11
PRE4YFR050C YNL143CP53908 130 aa1.9□□□□□ -2.11
PRE4YFR050C SAM50P53969 484 aa1.9□□□□□ -2.11
PRE4YFR050C PRO2P54885 456 aaKnown RBP1.9□□□□□ -2.11
PRE4YFR050C CDC45Q08032 650 aa1.9□□□□□ -2.11
PRE4YFR050C ETT1Q08421 412 aaKnown RBP1.9□□□□□ -2.11
PRE4YFR050C FOL3Q12676 427 aaPredicted RBP1.9□□□□□ -2.11
PRE4YFR050C MF(ALPHA)1P01149 165 aa1.89□□□□□ -2.11
PRE4YFR050C ARD1P07347 238 aaPredicted RBP1.89□□□□□ -2.11
PRE4YFR050C PRP16P15938 1071 aaPredicted RBP1.89□□□□□ -2.11
PRE4YFR050C UBA1P22515 1024 aaKnown RBP1.89□□□□□ -2.11
PRE4YFR050C BUD5P25300 642 aaPredicted RBP1.89□□□□□ -2.11
PRE4YFR050C CHA1P25379 360 aaKnown RBP1.89□□□□□ -2.11
PRE4YFR050C NDC1P32500 655 aa1.89□□□□□ -2.11
PRE4YFR050C MUD1P32605 298 aaKnown RBP1.89□□□□□ -2.11
PRE4YFR050C YBL055CP34220 418 aaPredicted RBP1.89□□□□□ -2.11
PRE4YFR050C ECM15P35195 104 aa1.89□□□□□ -2.11
PRE4YFR050C AUR1P36107 401 aaPredicted RBP1.89□□□□□ -2.11
PRE4YFR050C RPL32P38061 130 aaKnown RBP1.89□□□□□ -2.11
PRE4YFR050C YEL073CP39974 107 aa1.89□□□□□ -2.11
PRE4YFR050C DPH1P40487 425 aaKnown RBP1.89□□□□□ -2.11
PRE4YFR050C NCA3P46955 337 aa1.89□□□□□ -2.11
PRE4YFR050C ASN2P49090 572 aaKnown RBP1.89□□□□□ -2.11
PRE4YFR050C YGR126WP53274 230 aa1.89□□□□□ -2.11
PRE4YFR050C RHO4Q00246 291 aa1.89□□□□□ -2.11
PRE4YFR050C CDC14Q00684 551 aa1.89□□□□□ -2.11
PRE4YFR050C SHR3Q02774 210 aa1.89□□□□□ -2.11
PRE4YFR050C PRM15Q03262 622 aa1.89□□□□□ -2.11
PRE4YFR050C COG4Q06096 861 aa1.89□□□□□ -2.11
PRE4YFR050C CUR1Q06469 252 aa1.89□□□□□ -2.11
PRE4YFR050C APC5Q08683 685 aa1.89□□□□□ -2.11
PRE4YFR050C SET6Q12529 373 aa1.89□□□□□ -2.11
PRE4YFR050C YBR298C-AQ8TGK4 73 aa1.89□□□□□ -2.11
PRE4YFR050C SAL1D6W196 494 aa1.88□□□□□ -2.11
PRE4YFR050C REP1P03871 373 aa1.88□□□□□ -2.11
PRE4YFR050C YAK1P14680 807 aa1.88□□□□□ -2.11
PRE4YFR050C RPS2P25443 254 aaKnown RBP1.88□□□□□ -2.11
PRE4YFR050C POL4P25615 582 aa1.88□□□□□ -2.11
PRE4YFR050C ATS1P31386 333 aa1.88□□□□□ -2.11
PRE4YFR050C YBP1P38315 674 aa1.88□□□□□ -2.11
PRE4YFR050C YEL068CP39977 110 aa1.88□□□□□ -2.11
PRE4YFR050C GAT4P40569 121 aa1.88□□□□□ -2.11
PRE4YFR050C LCB2P40970 561 aa1.88□□□□□ -2.11
PRE4YFR050C DLD2P46681 530 aaKnown RBP1.88□□□□□ -2.11
PRE4YFR050C EFM6P53970 246 aa1.88□□□□□ -2.11
PRE4YFR050C CIK1Q01649 594 aa1.88□□□□□ -2.11
PRE4YFR050C ARX1Q03862 593 aaKnown RBP1.88□□□□□ -2.11
PRE4YFR050C TAF9Q05027 157 aa1.88□□□□□ -2.11
PRE4YFR050C LUC7Q07508 261 aaPredicted RBP1.88□□□□□ -2.11
PRE4YFR050C THI20Q08224 551 aa1.88□□□□□ -2.11
PRE4YFR050C UIP4Q08926 304 aa1.88□□□□□ -2.11
PRE4YFR050C FMP40Q08968 688 aaPredicted RBP1.88□□□□□ -2.11
PRE4YFR050C YOR032W-AQ8TGS1 66 aa1.88□□□□□ -2.11
PRE4YFR050C YBR126W-AQ8TGU7 68 aa1.88□□□□□ -2.11
PRE4YFR050C Q0144Q9ZZW2 109 aa1.88□□□□□ -2.11
PRE4YFR050C GDH1P07262 454 aaKnown RBP1.87□□□□□ -2.11
PRE4YFR050C PEP5P12868 1029 aa1.87□□□□□ -2.11
PRE4YFR050C KGD1P20967 1014 aaKnown RBP1.87□□□□□ -2.11
PRE4YFR050C SSE2P32590 693 aaKnown RBP1.87□□□□□ -2.11
PRE4YFR050C RPT5P33297 434 aaKnown RBP1.87□□□□□ -2.11
PRE4YFR050C SFC1P33303 322 aa1.87□□□□□ -2.11
PRE4YFR050C SIP2P34164 415 aaKnown RBP1.87□□□□□ -2.11
PRE4YFR050C YBR144CP34215 104 aa1.87□□□□□ -2.11
PRE4YFR050C YHL044WP38727 235 aa1.87□□□□□ -2.11
PRE4YFR050C MNL1P38888 796 aa1.87□□□□□ -2.11
PRE4YFR050C KRE9P39005 276 aa1.87□□□□□ -2.11
PRE4YFR050C CIN4P39110 191 aa1.87□□□□□ -2.11
PRE4YFR050C RPH1P39956 796 aa1.87□□□□□ -2.11
PRE4YFR050C EDC3P39998 551 aaKnown RBP1.87□□□□□ -2.11
PRE4YFR050C YIL029CP40538 142 aa1.87□□□□□ -2.11
PRE4YFR050C YJL213WP40896 331 aa1.87□□□□□ -2.11
PRE4YFR050C YFR018CP43599 363 aa1.87□□□□□ -2.11
PRE4YFR050C MEP3P53390 489 aa1.87□□□□□ -2.11
PRE4YFR050C SMF3Q12078 473 aaPredicted RBP1.87□□□□□ -2.11
PRE4YFR050C RTR2Q12378 196 aa1.87□□□□□ -2.11
PRE4YFR050C GIS3Q12418 502 aa1.87□□□□□ -2.11
PRE4YFR050C NOP58Q12499 511 aaKnown RBP1.87□□□□□ -2.11
PRE4YFR050C RPL20AP0CX23 172 aaKnown RBP1.86□□□□□ -2.11
PRE4YFR050C RPL20BP0CX24 172 aaPredicted RBP1.86□□□□□ -2.11
PRE4YFR050C NOP1P15646 327 aaKnown RBP1.86□□□□□ -2.11
PRE4YFR050C THR4P16120 514 aaKnown RBP1.86□□□□□ -2.11
PRE4YFR050C EST1P17214 699 aaPredicted RBP1.86□□□□□ -2.11
PRE4YFR050C ISY1P21374 235 aaPredicted RBP1.86□□□□□ -2.11
PRE4YFR050C PHO84P25297 587 aaKnown RBP1.86□□□□□ -2.11
PRE4YFR050C BUB3P26449 341 aa1.86□□□□□ -2.11
PRE4YFR050C MCM10P32354 571 aa1.86□□□□□ -2.11
PRE4YFR050C MEI5P32489 222 aa1.86□□□□□ -2.11
PRE4YFR050C FIG1P38224 298 aa1.86□□□□□ -2.11
PRE4YFR050C YHR218WP38899 603 aa1.86□□□□□ -2.11
PRE4YFR050C VPS52P39904 641 aa1.86□□□□□ -2.11
PRE4YFR050C YFL064CP43540 174 aa1.86□□□□□ -2.11
PRE4YFR050C YJL132WP47014 750 aa1.86□□□□□ -2.11
PRE4YFR050C YHC3P47040 408 aa1.86□□□□□ -2.11
PRE4YFR050C RAD17P48581 401 aa1.86□□□□□ -2.11
PRE4YFR050C RBG2P53295 368 aaKnown RBP1.86□□□□□ -2.11
PRE4YFR050C BUD32P53323 261 aa1.86□□□□□ -2.11
PRE4YFR050C FRE4P53746 719 aa1.86□□□□□ -2.11
PRE4YFR050C YMR087WQ04299 284 aa1.86□□□□□ -2.11
PRE4YFR050C IVY1Q04934 453 aa1.86□□□□□ -2.11
PRE4YFR050C NOP6Q07623 225 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms