RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W RIP1P08067 215 aa3.85□□□□□ -1.79
UBP6YFR010W YLL053CP0CD98 152 aa3.85□□□□□ -1.79
UBP6YFR010W MAS2P11914 482 aa3.85□□□□□ -1.79
UBP6YFR010W POX1P13711 748 aa3.85□□□□□ -1.79
UBP6YFR010W YMR31P19955 123 aa3.85□□□□□ -1.79
UBP6YFR010W CKI1P20485 582 aa3.85□□□□□ -1.79
UBP6YFR010W PDE1P22434 369 aa3.85□□□□□ -1.79
UBP6YFR010W CNA1P23287 553 aa3.85□□□□□ -1.79
UBP6YFR010W CTR86P25355 563 aa3.85□□□□□ -1.79
UBP6YFR010W PUT3P25502 979 aaPredicted RBP3.85□□□□□ -1.79
UBP6YFR010W NDC1P32500 655 aa3.85□□□□□ -1.79
UBP6YFR010W DSS4P32601 143 aa3.85□□□□□ -1.79
UBP6YFR010W CDC13P32797 924 aaKnown RBP3.85□□□□□ -1.79
UBP6YFR010W UTP11P34247 250 aaPredicted RBP3.85□□□□□ -1.79
UBP6YFR010W SPT10P35208 640 aa3.85□□□□□ -1.79
UBP6YFR010W YKL063CP35725 167 aa3.85□□□□□ -1.79
UBP6YFR010W NTR2P36118 322 aaPredicted RBP3.85□□□□□ -1.79
UBP6YFR010W QDR3P38227 689 aa3.85□□□□□ -1.79
UBP6YFR010W SSH1P38353 490 aaKnown RBP3.85□□□□□ -1.79
UBP6YFR010W ARO9P38840 513 aaPredicted RBP3.85□□□□□ -1.79
UBP6YFR010W SRP14P38985 146 aa3.85□□□□□ -1.79
UBP6YFR010W DSE1P40077 573 aa3.85□□□□□ -1.79
UBP6YFR010W YGL108CP53139 140 aa3.85□□□□□ -1.79
UBP6YFR010W YGR079WP53249 370 aa3.85□□□□□ -1.79
UBP6YFR010W SPC98P53540 846 aa3.85□□□□□ -1.79
UBP6YFR010W GOR1P53839 350 aa3.85□□□□□ -1.79
UBP6YFR010W APM1Q00776 475 aaPredicted RBP3.85□□□□□ -1.79
UBP6YFR010W RPS15Q01855 142 aaKnown RBP3.85□□□□□ -1.79
UBP6YFR010W RMI1Q02685 241 aa3.85□□□□□ -1.79
UBP6YFR010W COQ9Q05779 260 aa3.85□□□□□ -1.79
UBP6YFR010W NDE2Q07500 545 aa3.85□□□□□ -1.79
UBP6YFR010W ATG9Q12142 997 aa3.85□□□□□ -1.79
UBP6YFR010W PER33Q12144 273 aa3.85□□□□□ -1.79
UBP6YFR010W AIM45Q12480 344 aaKnown RBP3.85□□□□□ -1.79
UBP6YFR010W ECM3Q99252 613 aa3.85□□□□□ -1.79
UBP6YFR010W YDR157WA0A023PZE8 133 aa3.85□□□□□ -1.79
UBP6YFR010W HPR1P17629 752 aaKnown RBP3.85□□□□□ -1.79
UBP6YFR010W YSP3P25036 478 aa3.85□□□□□ -1.79
UBP6YFR010W FEN2P25621 512 aaKnown RBP3.85□□□□□ -1.79
UBP6YFR010W RFA3P26755 122 aaKnown RBP3.85□□□□□ -1.79
UBP6YFR010W IDH1P28834 360 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
UBP6YFR010W GMH1P36125 273 aa3.85□□□□□ -1.79
UBP6YFR010W MOH1P38191 138 aa3.85□□□□□ -1.79
UBP6YFR010W TRM5P38793 499 aa3.85□□□□□ -1.79
UBP6YFR010W UIP3P39547 235 aa3.85□□□□□ -1.79
UBP6YFR010W ECM10P39987 644 aa3.85□□□□□ -1.79
UBP6YFR010W VRG4P40107 337 aa3.85□□□□□ -1.79
UBP6YFR010W COA1P40452 197 aa3.85□□□□□ -1.79
UBP6YFR010W PAC11P40960 533 aa3.85□□□□□ -1.79
UBP6YFR010W MDV1P47025 714 aa3.85□□□□□ -1.79
UBP6YFR010W VPS73P53142 486 aaKnown RBP3.85□□□□□ -1.79
UBP6YFR010W COG2P53271 262 aa3.85□□□□□ -1.79
UBP6YFR010W ZRG17P53735 605 aa3.85□□□□□ -1.79
UBP6YFR010W IST1P53843 298 aaPredicted RBP3.85□□□□□ -1.79
UBP6YFR010W ALG11P53954 548 aaKnown RBP3.85□□□□□ -1.79
UBP6YFR010W PEX10Q05568 337 aa3.85□□□□□ -1.79
UBP6YFR010W COQ11Q05892 277 aa3.85□□□□□ -1.79
UBP6YFR010W MDM30Q05930 598 aa3.85□□□□□ -1.79
UBP6YFR010W YOL019WQ08157 551 aa3.85□□□□□ -1.79
UBP6YFR010W FRE5Q08908 694 aa3.85□□□□□ -1.79
UBP6YFR010W ADE4P04046 510 aaKnown RBP3.84□□□□□ -1.8
UBP6YFR010W RAD50P12753 1312 aa3.84□□□□□ -1.8
UBP6YFR010W PCT1P13259 424 aa3.84□□□□□ -1.8
UBP6YFR010W CLN3P13365 580 aa3.84□□□□□ -1.8
UBP6YFR010W ACH1P32316 526 aa3.84□□□□□ -1.8
UBP6YFR010W OAR1P35731 278 aa3.84□□□□□ -1.8
UBP6YFR010W VPS21P36017 210 aaKnown RBP3.84□□□□□ -1.8
UBP6YFR010W YKL162CP36052 402 aa3.84□□□□□ -1.8
UBP6YFR010W AAP1P37898 856 aaKnown RBP3.84□□□□□ -1.8
UBP6YFR010W DER1P38307 211 aa3.84□□□□□ -1.8
UBP6YFR010W HIS2P38635 335 aa3.84□□□□□ -1.8
UBP6YFR010W SEO1P39709 593 aa3.84□□□□□ -1.8
UBP6YFR010W PCI8P40512 444 aa3.84□□□□□ -1.8
UBP6YFR010W SNL1P40548 159 aa3.84□□□□□ -1.8
UBP6YFR010W BAP3P41815 604 aa3.84□□□□□ -1.8
UBP6YFR010W ATG27P46989 271 aa3.84□□□□□ -1.8
UBP6YFR010W NSA1P53136 463 aaPredicted RBP3.84□□□□□ -1.8
UBP6YFR010W MTL1P53214 551 aa3.84□□□□□ -1.8
UBP6YFR010W MRPS35P53292 345 aa3.84□□□□□ -1.8
UBP6YFR010W FYV6P53913 173 aa3.84□□□□□ -1.8
UBP6YFR010W SLG1P54867 378 aa3.84□□□□□ -1.8
UBP6YFR010W UBX2Q04228 584 aa3.84□□□□□ -1.8
UBP6YFR010W DXO1Q06349 442 aa3.84□□□□□ -1.8
UBP6YFR010W YLR053CQ12026 108 aa3.84□□□□□ -1.8
UBP6YFR010W MRH1Q12117 320 aaPredicted RBP3.84□□□□□ -1.8
UBP6YFR010W SIA1Q12212 622 aa3.84□□□□□ -1.8
UBP6YFR010W RUP1Q12242 671 aa3.84□□□□□ -1.8
UBP6YFR010W TPT1Q12272 230 aaKnown RBP3.84□□□□□ -1.8
UBP6YFR010W EMP46Q12396 444 aa3.84□□□□□ -1.8
UBP6YFR010W SNF8Q12483 233 aa3.84□□□□□ -1.8
UBP6YFR010W ARP6Q12509 438 aa3.84□□□□□ -1.8
UBP6YFR010W SCEIP03882 235 aa3.83□□□□□ -1.8
UBP6YFR010W RHO2P06781 192 aa3.83□□□□□ -1.8
UBP6YFR010W SGV1P23293 657 aaKnown RBP3.83□□□□□ -1.8
UBP6YFR010W RAD57P25301 460 aa3.83□□□□□ -1.8
UBP6YFR010W RGT1P32862 1170 aa3.83□□□□□ -1.8
UBP6YFR010W LOS1P33418 1100 aaPredicted RBP3.83□□□□□ -1.8
UBP6YFR010W MCH2P36032 473 aa3.83□□□□□ -1.8
UBP6YFR010W MRPL7P36519 292 aa3.83□□□□□ -1.8
UBP6YFR010W VHC1P38329 1120 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms