RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W GDH1P07262 454 aaKnown RBP4.59□□□□□ -1.67
UBC6YER100W SSC1P0CS90 654 aaKnown RBP4.59□□□□□ -1.67
UBC6YER100W CAP2P13517 287 aa4.59□□□□□ -1.67
UBC6YER100W MTF1P14908 341 aaKnown RBP4.59□□□□□ -1.67
UBC6YER100W SAM2P19358 384 aaKnown RBP4.59□□□□□ -1.67
UBC6YER100W EXG1P23776 448 aaKnown RBP4.59□□□□□ -1.67
UBC6YER100W DCC1P25559 380 aa4.59□□□□□ -1.67
UBC6YER100W HXT1P32465 570 aa4.59□□□□□ -1.67
UBC6YER100W NDC1P32500 655 aa4.59□□□□□ -1.67
UBC6YER100W RAD23P32628 398 aaKnown RBP4.59□□□□□ -1.67
UBC6YER100W COT1P32798 439 aa4.59□□□□□ -1.67
UBC6YER100W ECT1P33412 323 aa4.59□□□□□ -1.67
UBC6YER100W IST2P38250 946 aa4.59□□□□□ -1.67
UBC6YER100W FET3P38993 636 aa4.59□□□□□ -1.67
UBC6YER100W YPL199CQ08954 240 aa4.59□□□□□ -1.67
UBC6YER100W PUT3P25502 979 aaPredicted RBP4.58□□□□□ -1.68
UBC6YER100W ACB1P31787 87 aa4.58□□□□□ -1.68
UBC6YER100W GPX2P38143 162 aa4.58□□□□□ -1.68
UBC6YER100W CHK1P38147 527 aa4.58□□□□□ -1.68
UBC6YER100W MIX23P38162 196 aa4.58□□□□□ -1.68
UBC6YER100W SCC4P40090 624 aa4.58□□□□□ -1.68
UBC6YER100W JLP2P40206 208 aa4.58□□□□□ -1.68
UBC6YER100W RTT101P47050 842 aa4.58□□□□□ -1.68
UBC6YER100W ABM1P47146 123 aa4.58□□□□□ -1.68
UBC6YER100W TAF6P53040 516 aa4.58□□□□□ -1.68
UBC6YER100W LST7P53237 242 aa4.58□□□□□ -1.68
UBC6YER100W COS1P53822 381 aa4.58□□□□□ -1.68
UBC6YER100W IBD2P53892 351 aa4.58□□□□□ -1.68
UBC6YER100W PIR3Q03180 325 aa4.58□□□□□ -1.68
UBC6YER100W CCE1Q03702 353 aa4.58□□□□□ -1.68
UBC6YER100W BUR2Q05949 395 aa4.58□□□□□ -1.68
UBC6YER100W BOP2Q06150 570 aa4.58□□□□□ -1.68
UBC6YER100W YLL007CQ07799 665 aa4.58□□□□□ -1.68
UBC6YER100W ALE1Q08548 619 aa4.58□□□□□ -1.68
UBC6YER100W RAD1P06777 1100 aa4.57□□□□□ -1.68
UBC6YER100W MRS3P10566 314 aa4.57□□□□□ -1.68
UBC6YER100W UNG1P12887 359 aa4.57□□□□□ -1.68
UBC6YER100W RSR1P13856 272 aa4.57□□□□□ -1.68
UBC6YER100W UTR1P21373 530 aa4.57□□□□□ -1.68
UBC6YER100W RNA14P25298 677 aaKnown RBP4.57□□□□□ -1.68
UBC6YER100W ERG9P29704 444 aa4.57□□□□□ -1.68
UBC6YER100W TRS65P32893 560 aa4.57□□□□□ -1.68
UBC6YER100W TIR2P33890 251 aa4.57□□□□□ -1.68
UBC6YER100W ASK1P35734 292 aa4.57□□□□□ -1.68
UBC6YER100W MYO3P36006 1272 aa4.57□□□□□ -1.68
UBC6YER100W PMU1P36069 295 aa4.57□□□□□ -1.68
UBC6YER100W YMR262WP38430 313 aa4.57□□□□□ -1.68
UBC6YER100W XBP1P40489 647 aa4.57□□□□□ -1.68
UBC6YER100W GCN20P43535 752 aaKnown RBP4.57□□□□□ -1.68
UBC6YER100W COX16P47081 118 aa4.57□□□□□ -1.68
UBC6YER100W NAS6P50086 228 aa4.57□□□□□ -1.68
UBC6YER100W YGR168CP53293 376 aa4.57□□□□□ -1.68
UBC6YER100W YNL050CP53952 270 aa4.57□□□□□ -1.68
UBC6YER100W YLR173WQ06247 608 aa4.57□□□□□ -1.68
UBC6YER100W NDE2Q07500 545 aa4.57□□□□□ -1.68
UBC6YER100W MED4Q12343 284 aa4.57□□□□□ -1.68
UBC6YER100W YPR1Q12458 312 aa4.57□□□□□ -1.68
UBC6YER100W SLY1P22213 666 aa4.56□□□□□ -1.68
UBC6YER100W NTG1P31378 399 aa4.56□□□□□ -1.68
UBC6YER100W PHA2P32452 334 aa4.56□□□□□ -1.68
UBC6YER100W YKL162CP36052 402 aa4.56□□□□□ -1.68
UBC6YER100W CUE2P36075 443 aaKnown RBP4.56□□□□□ -1.68
UBC6YER100W RIB5P38145 238 aa4.56□□□□□ -1.68
UBC6YER100W GEP4P38812 185 aa4.56□□□□□ -1.68
UBC6YER100W ATG7P38862 630 aa4.56□□□□□ -1.68
UBC6YER100W RBG1P39729 369 aa4.56□□□□□ -1.68
UBC6YER100W KEG1P43614 200 aa4.56□□□□□ -1.68
UBC6YER100W LSB1P53281 241 aa4.56□□□□□ -1.68
UBC6YER100W LSC1P53598 329 aaKnown RBP4.56□□□□□ -1.68
UBC6YER100W FMP42Q04991 504 aa4.56□□□□□ -1.68
UBC6YER100W THI7Q05998 598 aa4.56□□□□□ -1.68
UBC6YER100W MDM36Q06820 579 aa4.56□□□□□ -1.68
UBC6YER100W SIA1Q12212 622 aa4.56□□□□□ -1.68
UBC6YER100W MEX67Q99257 599 aaKnown RBP4.56□□□□□ -1.68
UBC6YER100W RPL20AP0CX23 172 aaKnown RBP4.55□□□□□ -1.68
UBC6YER100W RPL20BP0CX24 172 aaPredicted RBP4.55□□□□□ -1.68
UBC6YER100W CDC23P16522 626 aa4.55□□□□□ -1.68
UBC6YER100W YKR015CP36111 568 aa4.55□□□□□ -1.68
UBC6YER100W YBR137WP38276 179 aa4.55□□□□□ -1.68
UBC6YER100W MTC4P38335 694 aaKnown RBP4.55□□□□□ -1.68
UBC6YER100W CTM1P38818 585 aa4.55□□□□□ -1.68
UBC6YER100W YHR182WP38870 785 aa4.55□□□□□ -1.68
UBC6YER100W FMP33P46998 180 aa4.55□□□□□ -1.68
UBC6YER100W MKC7P53379 596 aa4.55□□□□□ -1.68
UBC6YER100W STP1Q00947 519 aa4.55□□□□□ -1.68
UBC6YER100W HER2Q03557 464 aa4.55□□□□□ -1.68
UBC6YER100W RRN11Q04712 507 aa4.55□□□□□ -1.68
UBC6YER100W ARV1Q06541 321 aa4.55□□□□□ -1.68
UBC6YER100W SNX3Q08826 162 aaKnown RBP4.55□□□□□ -1.68
UBC6YER100W FRS2P15625 503 aaKnown RBP4.54□□□□□ -1.68
UBC6YER100W GPI12P23797 304 aa4.54□□□□□ -1.68
UBC6YER100W RBK1P25332 333 aa4.54□□□□□ -1.68
UBC6YER100W DAL2P25335 343 aa4.54□□□□□ -1.68
UBC6YER100W SPR1P32603 445 aa4.54□□□□□ -1.68
UBC6YER100W MRP4P32902 394 aa4.54□□□□□ -1.68
UBC6YER100W ATO2P32907 282 aa4.54□□□□□ -1.68
UBC6YER100W IML3P38265 245 aa4.54□□□□□ -1.68
UBC6YER100W YBP1P38315 674 aa4.54□□□□□ -1.68
UBC6YER100W ARC40P38328 384 aaKnown RBP4.54□□□□□ -1.68
UBC6YER100W TAE1P38340 232 aa4.54□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms