RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	DPB11	P47027	764 aa	Predicted RBP	3.94	□□□□□ -1.78
UBC8	YEL012W	YGR015C	P53208	328 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	ATP23	P53722	227 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	MRPL19	P53875	158 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	UTP21	Q06078	939 aa	Predicted RBP	3.94	□□□□□ -1.78
UBC8	YEL012W	PDR8	Q06149	701 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	YEH1	Q07804	573 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	RCN2	Q12044	265 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	RGT2	Q12300	763 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	YPT6	Q99260	215 aa		3.94	□□□□□ -1.78
UBC8	YEL012W	RAD1	P06777	1100 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	SSA3	P09435	649 aa	Known RBP	3.93	□□□□□ -1.78
UBC8	YEL012W	CBS1	P14066	229 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	KGD1	P20967	1014 aa	Known RBP	3.93	□□□□□ -1.78
UBC8	YEL012W	URA10	P30402	227 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	SKT5	P34226	696 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	PEX5	P35056	612 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	MIA40	P36046	403 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	EBP2	P36049	427 aa	Known RBP	3.93	□□□□□ -1.78
UBC8	YEL012W	RRN10	P38204	145 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	VHC1	P38329	1120 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	ARN1	P38731	627 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	LSM4	P40070	187 aa	Known RBP	3.93	□□□□□ -1.78
UBC8	YEL012W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
UBC8	YEL012W	ASI1	P54074	624 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	GOT1	Q03554	138 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	TAF12	Q03761	539 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	ATG29	Q12092	213 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	YLR049C	Q12110	428 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	YRA1	Q12159	226 aa	Known RBP	3.93	□□□□□ -1.78
UBC8	YEL012W	YOR342C	Q12182	319 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	YJR112W-A	Q3E743	109 aa		3.93	□□□□□ -1.78
UBC8	YEL012W	BPH1	P25356	2167 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	CKA1	P15790	372 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	VMA16	P23968	213 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	GRR1	P24814	1151 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	CLB2	P24869	491 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	ATG15	P25641	520 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	ADE1	P27616	306 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	ZIP1	P31111	875 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	SRB4	P32569	687 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	NPL6	P32832	435 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	OM14	P38325	134 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	POP4	P38336	279 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	GGC1	P38988	300 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	MET28	P40573	187 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	IRC7	P43623	340 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	NMD5	P46970	1048 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	PET130	P47065	347 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	YJR149W	P47177	404 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	APT1	P49435	187 aa	Known RBP	3.92	□□□□□ -1.78
UBC8	YEL012W	MPS2	P53159	387 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	ERG13	P54839	491 aa	Known RBP	3.92	□□□□□ -1.78
UBC8	YEL012W	SPP2	Q02521	185 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	RSC9	Q03124	581 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	PFA5	Q03289	374 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	YDR209C	Q03480	137 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	YMR034C	Q05131	434 aa	Predicted RBP	3.92	□□□□□ -1.78
UBC8	YEL012W	CDC123	Q05791	360 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	MCH4	Q08268	501 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	UBX3	Q12229	455 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	SCM3	Q12334	223 aa		3.92	□□□□□ -1.78
UBC8	YEL012W	MET17	P06106	444 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	CMD1	P06787	147 aa	Known RBP	3.91	□□□□□ -1.78
UBC8	YEL012W	YMR085W	P0CF18	432 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	CBF1	P17106	351 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	APN1	P22936	367 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	SEC14	P24280	304 aa	Known RBP	3.91	□□□□□ -1.78
UBC8	YEL012W	ROX1	P25042	368 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	TPS2	P31688	896 aa	Known RBP	3.91	□□□□□ -1.78
UBC8	YEL012W	ERG3	P32353	365 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	PTM1	P32857	523 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	NFU1	P32860	256 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	TIF3	P34167	436 aa	Known RBP	3.91	□□□□□ -1.78
UBC8	YEL012W	KKQ8	P36004	724 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	YBR139W	P38109	508 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	NPT1	P39683	429 aa	Known RBP	3.91	□□□□□ -1.78
UBC8	YEL012W	RPL10	P41805	221 aa	Known RBP	3.91	□□□□□ -1.78
UBC8	YEL012W	BIO3	P50277	480 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	DIA3	P52290	468 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	ROG1	P53118	685 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	YGR250C	P53316	781 aa	Known RBP	3.91	□□□□□ -1.78
UBC8	YEL012W	OAZ1	Q02803	292 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	LUC7	Q07508	261 aa	Predicted RBP	3.91	□□□□□ -1.78
UBC8	YEL012W	CUE5	Q08412	411 aa	Known RBP	3.91	□□□□□ -1.78
UBC8	YEL012W	YOR376W	Q08900	122 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	FRE3	Q08905	711 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	MDM32	Q12171	622 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	YPR011C	Q12251	326 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	SRN2	Q99176	213 aa		3.91	□□□□□ -1.78
UBC8	YEL012W	OCA4	P25366	362 aa		3.9	□□□□□ -1.79
UBC8	YEL012W	MGR1	P25573	417 aa		3.9	□□□□□ -1.79
UBC8	YEL012W	TAH1	P25638	111 aa	Predicted RBP	3.9	□□□□□ -1.79
UBC8	YEL012W	URA7	P28274	579 aa	Known RBP	3.9	□□□□□ -1.79
UBC8	YEL012W	PMT2	P31382	759 aa		3.9	□□□□□ -1.79
UBC8	YEL012W	SAC1	P32368	623 aa	Known RBP	3.9	□□□□□ -1.79
UBC8	YEL012W	ERG1	P32476	496 aa	Known RBP	3.9	□□□□□ -1.79
UBC8	YEL012W	MKK1	P32490	508 aa		3.9	□□□□□ -1.79
UBC8	YEL012W	MFT1	P33441	392 aa	Known RBP	3.9	□□□□□ -1.79
UBC8	YEL012W	CBP4	P37267	147 aa		3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms