RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C RPA34P47006 233 aaPredicted RBP2.72□□□□□ -1.97
VAB2YEL005C TRF5P48561 642 aaKnown RBP2.72□□□□□ -1.97
VAB2YEL005C ATP22P50273 684 aaPredicted RBP2.72□□□□□ -1.97
VAB2YEL005C CRH1P53301 507 aa2.72□□□□□ -1.97
VAB2YEL005C YMR310CQ04867 317 aaPredicted RBP2.72□□□□□ -1.97
VAB2YEL005C YDL114WQ07530 308 aa2.72□□□□□ -1.97
VAB2YEL005C SHS1Q07657 551 aa2.72□□□□□ -1.97
VAB2YEL005C PLP2Q12017 286 aa2.72□□□□□ -1.97
VAB2YEL005C NFI1Q12216 726 aa2.72□□□□□ -1.97
VAB2YEL005C NBL1Q3E7Y6 73 aa2.72□□□□□ -1.97
VAB2YEL005C NAG1Q8TGN9 163 aa2.72□□□□□ -1.97
VAB2YEL005C MAS1P10507 462 aa2.71□□□□□ -1.98
VAB2YEL005C NAT1P12945 854 aaKnown RBP2.71□□□□□ -1.98
VAB2YEL005C RPL16AP26784 199 aaKnown RBP2.71□□□□□ -1.98
VAB2YEL005C EFB1P32471 206 aaKnown RBP2.71□□□□□ -1.98
VAB2YEL005C NUP2P32499 720 aa2.71□□□□□ -1.98
VAB2YEL005C SSE1P32589 693 aaKnown RBP2.71□□□□□ -1.98
VAB2YEL005C IES6P32617 166 aa2.71□□□□□ -1.98
VAB2YEL005C YHR177WP38867 453 aa2.71□□□□□ -1.98
VAB2YEL005C YHR182WP38870 785 aa2.71□□□□□ -1.98
VAB2YEL005C GAB1P41733 394 aa2.71□□□□□ -1.98
VAB2YEL005C TOS2P50078 622 aa2.71□□□□□ -1.98
VAB2YEL005C RRN9P53437 365 aa2.71□□□□□ -1.98
VAB2YEL005C AQR1P53943 586 aa2.71□□□□□ -1.98
VAB2YEL005C MHR1Q06630 226 aa2.71□□□□□ -1.98
VAB2YEL005C HMX1P32339 317 aa2.7□□□□□ -1.98
VAB2YEL005C SMI1P32566 505 aa2.7□□□□□ -1.98
VAB2YEL005C YIL089WP40500 205 aa2.7□□□□□ -1.98
VAB2YEL005C YNR068CP53754 272 aa2.7□□□□□ -1.98
VAB2YEL005C PRM1P53835 661 aa2.7□□□□□ -1.98
VAB2YEL005C REX2P54964 269 aaKnown RBP2.7□□□□□ -1.98
VAB2YEL005C HAL1Q01766 294 aa2.7□□□□□ -1.98
VAB2YEL005C ADD37Q03233 198 aa2.7□□□□□ -1.98
VAB2YEL005C CDC50P25656 391 aa2.69□□□□□ -1.98
VAB2YEL005C SPO23P33757 523 aa2.69□□□□□ -1.98
VAB2YEL005C ATG18P43601 500 aa2.69□□□□□ -1.98
VAB2YEL005C CUE3P53137 624 aaKnown RBP2.69□□□□□ -1.98
VAB2YEL005C YET2Q04210 160 aa2.69□□□□□ -1.98
VAB2YEL005C NOP6Q07623 225 aaKnown RBP2.69□□□□□ -1.98
VAB2YEL005C YDL199CQ12407 687 aa2.69□□□□□ -1.98
VAB2YEL005C YOR338WQ99326 363 aa2.69□□□□□ -1.98
VAB2YEL005C FSH3Q99369 266 aa2.69□□□□□ -1.98
VAB2YEL005C RPS18AP0CX55 146 aaKnown RBP2.68□□□□□ -1.98
VAB2YEL005C RPS18BP0CX56 146 aaPredicted RBP2.68□□□□□ -1.98
VAB2YEL005C THR4P16120 514 aaKnown RBP2.68□□□□□ -1.98
VAB2YEL005C DBR1P24309 405 aaKnown RBP2.68□□□□□ -1.98
VAB2YEL005C PCL1P24867 279 aa2.68□□□□□ -1.98
VAB2YEL005C RDS1P25611 832 aa2.68□□□□□ -1.98
VAB2YEL005C FUN26P31381 517 aa2.68□□□□□ -1.98
VAB2YEL005C ADH5P38113 351 aaKnown RBP2.68□□□□□ -1.98
VAB2YEL005C LSM12P38828 187 aaKnown RBP2.68□□□□□ -1.98
VAB2YEL005C YJR030CP47101 745 aa2.68□□□□□ -1.98
VAB2YEL005C BNS1P50084 137 aa2.68□□□□□ -1.98
VAB2YEL005C RET3P53600 189 aa2.68□□□□□ -1.98
VAB2YEL005C COS1P53822 381 aa2.68□□□□□ -1.98
VAB2YEL005C DBP9Q06218 594 aaKnown RBP2.68□□□□□ -1.98
VAB2YEL005C STE7P06784 515 aa2.67□□□□□ -1.98
VAB2YEL005C MAS2P11914 482 aa2.67□□□□□ -1.98
VAB2YEL005C DAP2P18962 818 aa2.67□□□□□ -1.98
VAB2YEL005C SPR1P32603 445 aa2.67□□□□□ -1.98
VAB2YEL005C SIF2P38262 535 aa2.67□□□□□ -1.98
VAB2YEL005C WSC4P38739 605 aa2.67□□□□□ -1.98
VAB2YEL005C CAJ1P39101 391 aa2.67□□□□□ -1.98
VAB2YEL005C PTI1P39927 425 aaPredicted RBP2.67□□□□□ -1.98
VAB2YEL005C YER186CP40101 306 aa2.67□□□□□ -1.98
VAB2YEL005C TIS11P47977 285 aa2.67□□□□□ -1.98
VAB2YEL005C MKC7P53379 596 aa2.67□□□□□ -1.98
VAB2YEL005C YNL143CP53908 130 aa2.67□□□□□ -1.98
VAB2YEL005C KTR6P54070 446 aa2.67□□□□□ -1.98
VAB2YEL005C YLR152CP54072 576 aa2.67□□□□□ -1.98
VAB2YEL005C SKI8Q02793 397 aaPredicted RBP2.67□□□□□ -1.98
VAB2YEL005C RRB1Q04225 511 aaKnown RBP2.67□□□□□ -1.98
VAB2YEL005C AIM33Q04516 312 aa2.67□□□□□ -1.98
VAB2YEL005C ARR1Q06596 294 aa2.67□□□□□ -1.98
VAB2YEL005C MFG1Q07684 458 aa2.67□□□□□ -1.98
VAB2YEL005C PSK1P31374 1356 aa2.66□□□□□ -1.98
VAB2YEL005C STE3P06783 470 aa2.66□□□□□ -1.98
VAB2YEL005C TAL1P15019 335 aaKnown RBP2.66□□□□□ -1.98
VAB2YEL005C DEP1P31385 405 aa2.66□□□□□ -1.98
VAB2YEL005C HXT1P32465 570 aa2.66□□□□□ -1.98
VAB2YEL005C TOA2P32774 122 aa2.66□□□□□ -1.98
VAB2YEL005C PTK1P36002 662 aaPredicted RBP2.66□□□□□ -1.98
VAB2YEL005C COS9P36034 407 aa2.66□□□□□ -1.98
VAB2YEL005C UTH1P36135 365 aa2.66□□□□□ -1.98
VAB2YEL005C SOL2P37262 315 aa2.66□□□□□ -1.98
VAB2YEL005C PFS1P38872 237 aa2.66□□□□□ -1.98
VAB2YEL005C BAT1P38891 393 aaKnown RBP2.66□□□□□ -1.98
VAB2YEL005C RBG1P39729 369 aa2.66□□□□□ -1.98
VAB2YEL005C YGR016WP53209 190 aa2.66□□□□□ -1.98
VAB2YEL005C SMP3Q04174 516 aa2.66□□□□□ -1.98
VAB2YEL005C MSC3Q05812 728 aa2.66□□□□□ -1.98
VAB2YEL005C YLH47Q06493 454 aa2.66□□□□□ -1.98
VAB2YEL005C MCH1Q07376 486 aa2.66□□□□□ -1.98
VAB2YEL005C YOL075CQ08234 1294 aa2.66□□□□□ -1.98
VAB2YEL005C APC5Q08683 685 aa2.66□□□□□ -1.98
VAB2YEL005C YDL109CQ12103 647 aa2.66□□□□□ -1.98
VAB2YEL005C FOL3Q12676 427 aaPredicted RBP2.66□□□□□ -1.98
VAB2YEL005C HEM4P06174 275 aa2.65□□□□□ -1.99
VAB2YEL005C YLL053CP0CD98 152 aa2.65□□□□□ -1.99
VAB2YEL005C ZRC1P20107 442 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 80.3 ms